Eesti Biokeskuse publikatsioonid 2001-2017 | Tartu Ülikooli genoomika instituut

TÜ üksuste kontaktandmed

humanitaarteaduste ja kunstide valdkond
Faculty phone: 
737 5341
Faculty address: 
Jakobi 2, ruumid 116–121, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5341
    Faculty address: 
    Jakobi 2, ruumid 116–121, 51005 Tartu
  • ajaloo ja arheoloogia instituut
    Faculty phone: 
    737 5651
    Faculty address: 
    Jakobi 2, 51005 Tartu
  • eesti ja üldkeeleteaduse instituut
    Faculty phone: 
    737 5221
    Faculty address: 
    Jakobi 2, IV korrus, 51005 Tartu
  • filosoofia ja semiootika instituut
    Faculty phone: 
    737 5314
    Faculty address: 
    Jakobi 2, ruumid 309–352, 51005 Tartu
  • kultuuriteaduste instituut
    Faculty phone: 
    737 5223
    Faculty address: 
    Ülikooli 16, 51003 Tartu
  • maailma keelte ja kultuuride kolledž
    Faculty address: 
    Lossi 3, 51003 Tartu
  • usuteaduskond
    Faculty phone: 
    737 5300
    Faculty address: 
    Ülikooli 18-310, 50090 Tartu
  • Viljandi kultuuriakadeemia
    Faculty phone: 
    435 5232
    Faculty address: 
    Posti 1, 71004 Viljandi
sotsiaalteaduste valdkond
Faculty phone: 
737 5957
Faculty address: 
Lossi 36, 51003 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5900
    Faculty address: 
    Lossi 36, 51003 Tartu
  • haridusteaduste instituut
    Faculty phone: 
    737 6440
    Faculty address: 
    Salme 1a–29, 50103 Tartu
  • Johan Skytte poliitikauuringute instituut
    Faculty phone: 
    737 5582
    Faculty address: 
    Lossi 36–301, 51003 Tartu
  • majandusteaduskond
    Faculty phone: 
    737 6310
    Faculty address: 
    J. Liivi 4, 50409 Tartu
  • psühholoogia instituut
    Faculty phone: 
    737 5902
    Faculty address: 
    Näituse 2, 50409 Tartu
  • õigusteaduskond
    Faculty phone: 
    737 5390
    Faculty address: 
    Näituse 20–324, 50409 Tartu
  • ühiskonnateaduste instituut
    Faculty phone: 
    737 5188
    Faculty address: 
    Lossi 36, 51003 Tartu
  • Narva kolledž
    Faculty phone: 
    740 1900
    Faculty address: 
    Raekoja plats 2, 20307 Narva
  • Pärnu kolledž
    Faculty phone: 
    445 0520
    Faculty address: 
    Ringi 35, 80012 Pärnu
meditsiiniteaduste valdkond
Faculty phone: 
737 5326
Faculty address: 
Ravila 19, 50411 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5326
    Faculty address: 
    Ravila 19, 50411 Tartu
  • bio- ja siirdemeditsiini instituut
    Faculty phone: 
    737 4210
    Faculty address: 
    Biomeedikum, Ravila 19, 50411 Tartu
  • farmaatsia instituut
    Faculty phone: 
    737 5286
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • hambaarstiteaduse instituut
    Faculty phone: 
    731 9856
    Faculty address: 
    Raekoja plats 6, 51003 Tartu
  • kliinilise meditsiini instituut
    Faculty phone: 
    737 5323
    Faculty address: 
    L. Puusepa 8, 50406 Tartu
  • peremeditsiini ja rahvatervishoiu instituut
    Faculty phone: 
    737 4190
    Faculty address: 
    Ravila 19, 50411 Tartu
  • sporditeaduste ja füsioteraapia instituut
    Faculty phone: 
    737 5360
    Faculty address: 
    Jakobi 5–205, 51005 Tartu
loodus- ja täppisteaduste valdkond
Faculty phone: 
737 5820
Faculty address: 
Vanemuise 46–208, 51005 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5820
    Faculty address: 
    Vanemuise 46–208, 51005 Tartu
  • arvutiteaduse instituut
    Faculty phone: 
    737 5445
    Faculty address: 
    J. Liivi 2, 50409 Tartu
  • Eesti mereinstituut
    Faculty phone: 
    671 8902
    Faculty address: 
    Mäealuse 14, 12618 Tallinn
  • füüsika instituut
    Faculty address: 
    W. Ostwaldi 1, 50411 Tartu
  • keemia instituut
    Faculty phone: 
    737 5261
    Faculty address: 
    Ravila 14a, 50411 Tartu
  • matemaatika ja statistika instituut
    Faculty phone: 
    737 5860
    Faculty address: 
    J. Liivi 2, 50409 Tartu
  • molekulaar- ja rakubioloogia instituut
    Faculty phone: 
    737 5011
    Faculty address: 
    Riia 23, 23b–134, 51010 Tartu
  • Tartu observatoorium
    Faculty phone: 
    737 4510
    Faculty address: 
    Observatooriumi 1, Tõravere, 61602 Tartumaa
  • tehnoloogiainstituut
    Faculty phone: 
    737 4800
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • ökoloogia ja maateaduste instituut
    Faculty phone: 
    737 5835
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Asutused
  • raamatukogu
    Faculty phone: 
    737 5702
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • teaduskool
    Faculty phone: 
    737 5581
    Faculty address: 
    Uppsala 10, 51003 Tartu
  • genoomika instituut
    Faculty phone: 
    737 4000
    Faculty address: 
    Riia 23b, 51010 Tartu
  • muuseum
    Faculty phone: 
    737 5674
    Faculty address: 
    Lossi 25, 51003 Tartu
  • loodusmuuseum ja botaanikaaed
    Faculty phone: 
    737 6076
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Tugiüksused
  • ettevõtlus- ja innovatsioonikeskus
    Faculty phone: 
    737 6339
    Faculty address: 
    Lossi 3, III korrus, 51003 Tartu
  • grandikeskus
    Faculty phone: 
    737 6215
    Faculty address: 
    Lossi 3, III korrus, 51003 Tartu
  • hankeosakond
    Faculty phone: 
    737 6632
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • infotehnoloogia osakond
    Faculty phone: 
    737 6000, arvutiabi: 737 5500
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kantselei
    Faculty phone: 
    737 5606
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kinnisvaraosakond
    Faculty phone: 
    737 5137
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • personaliosakond
    Faculty phone: 
    737 5145
    Faculty address: 
    Ülikooli 18, ruumid 302 ja 304, 50090 Tartu
  • rahandusosakond
    Faculty phone: 
    737 5125
    Faculty address: 
    Jakobi 4, 51005 Tartu
  • rektoraadi büroo
    Faculty phone: 
    737 5600
    Faculty address: 
    Ülikooli 18, 51014 Tartu
  • siseauditi büroo
    Faculty address: 
    Ülikooli 17–103, 51005 Tartu
  • Tallinna esindus
    Faculty phone: 
    737 6600
    Faculty address: 
    Teatri väljak 3, 10143 Tallinn
  • turundus- ja kommunikatsiooniosakond
    Faculty phone: 
    737 5687
    Faculty address: 
    Ülikooli 18, ruumid 102, 104, 209, 210, 50090 Tartu
  • õppeosakond
    Faculty phone: 
    737 5620
    Faculty address: 
    Ülikooli 18, 50090 Tartu
  • üliõpilasesindus
    Faculty phone: 
    737 5400
    Faculty address: 
    Ülikooli 18b, 51005 Tartu
Muud üksused
  • MTÜ Tartu Ülikooli Akadeemiline Spordiklubi
    Faculty phone: 
    737 5371
    Faculty address: 
    Ujula 4, 51008 Tartu
  • MTÜ Tartu Üliõpilasküla
    Faculty phone: 
    740 9959
    Faculty address: 
    Narva mnt 25, 51013 Tartu
  • MTÜ Tartu Üliõpilasmaja
    Faculty phone: 
    730 2400
    Faculty address: 
    Kalevi 24, Tartu
  • OÜ Tartu Ülikooli Kirjastus
    Faculty phone: 
    737 5945
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • SA Tartu Ülikooli Kliinikum
    Faculty phone: 
    731 8111
    Faculty address: 
    L. Puusepa 1a, 50406 Tartu
  • Tartu Ülikooli Sihtasutus
    Faculty phone: 
    737 5852
    Faculty address: 
    Ülikooli 18a–106, Tartu

TÜ üksuste kontaktandmed

humanitaarteaduste ja kunstide valdkond
Faculty phone: 
737 5341
Faculty address: 
Jakobi 2, ruumid 116–121, 51014 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5341
    Faculty address: 
    Jakobi 2, ruumid 116–121, 51005 Tartu
  • ajaloo ja arheoloogia instituut
    Faculty phone: 
    737 5651
    Faculty address: 
    Jakobi 2, 51005 Tartu
  • eesti ja üldkeeleteaduse instituut
    Faculty phone: 
    737 5221
    Faculty address: 
    Jakobi 2, IV korrus, 51005 Tartu
  • filosoofia ja semiootika instituut
    Faculty phone: 
    737 5314
    Faculty address: 
    Jakobi 2, ruumid 309–352, 51005 Tartu
  • kultuuriteaduste instituut
    Faculty phone: 
    737 5223
    Faculty address: 
    Ülikooli 16, 51003 Tartu
  • maailma keelte ja kultuuride kolledž
    Faculty address: 
    Lossi 3, 51003 Tartu
  • usuteaduskond
    Faculty phone: 
    737 5300
    Faculty address: 
    Ülikooli 18-310, 50090 Tartu
  • Viljandi kultuuriakadeemia
    Faculty phone: 
    435 5232
    Faculty address: 
    Posti 1, 71004 Viljandi
sotsiaalteaduste valdkond
Faculty phone: 
737 5957
Faculty address: 
Lossi 36, 51003 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5900
    Faculty address: 
    Lossi 36, 51003 Tartu
  • haridusteaduste instituut
    Faculty phone: 
    737 6440
    Faculty address: 
    Salme 1a–29, 50103 Tartu
  • Johan Skytte poliitikauuringute instituut
    Faculty phone: 
    737 5582
    Faculty address: 
    Lossi 36–301, 51003 Tartu
  • majandusteaduskond
    Faculty phone: 
    737 6310
    Faculty address: 
    J. Liivi 4, 50409 Tartu
  • psühholoogia instituut
    Faculty phone: 
    737 5902
    Faculty address: 
    Näituse 2, 50409 Tartu
  • õigusteaduskond
    Faculty phone: 
    737 5390
    Faculty address: 
    Näituse 20–324, 50409 Tartu
  • ühiskonnateaduste instituut
    Faculty phone: 
    737 5188
    Faculty address: 
    Lossi 36, 51003 Tartu
  • Narva kolledž
    Faculty phone: 
    740 1900
    Faculty address: 
    Raekoja plats 2, 20307 Narva
  • Pärnu kolledž
    Faculty phone: 
    445 0520
    Faculty address: 
    Ringi 35, 80012 Pärnu
meditsiiniteaduste valdkond
Faculty phone: 
737 5326
Faculty address: 
Ravila 19, 50411 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5326
    Faculty address: 
    Ravila 19, 50411 Tartu
  • bio- ja siirdemeditsiini instituut
    Faculty phone: 
    737 4210
    Faculty address: 
    Biomeedikum, Ravila 19, 50411 Tartu
  • farmaatsia instituut
    Faculty phone: 
    737 5286
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • hambaarstiteaduse instituut
    Faculty phone: 
    731 9856
    Faculty address: 
    Raekoja plats 6, 51003 Tartu
  • kliinilise meditsiini instituut
    Faculty phone: 
    737 5323
    Faculty address: 
    L. Puusepa 8, 50406 Tartu
  • peremeditsiini ja rahvatervishoiu instituut
    Faculty phone: 
    737 4190
    Faculty address: 
    Ravila 19, 50411 Tartu
  • sporditeaduste ja füsioteraapia instituut
    Faculty phone: 
    737 5360
    Faculty address: 
    Jakobi 5–205, 51005 Tartu
loodus- ja täppisteaduste valdkond
Faculty phone: 
737 5820
Faculty address: 
Vanemuise 46–208, 51005 Tartu
  • valdkonna dekanaat
    Faculty phone: 
    737 5820
    Faculty address: 
    Vanemuise 46–208, 51005 Tartu
  • arvutiteaduse instituut
    Faculty phone: 
    737 5445
    Faculty address: 
    J. Liivi 2, 50409 Tartu
  • Eesti mereinstituut
    Faculty phone: 
    671 8902
    Faculty address: 
    Mäealuse 14, 12618 Tallinn
  • füüsika instituut
    Faculty address: 
    W. Ostwaldi 1, 50411 Tartu
  • keemia instituut
    Faculty phone: 
    737 5261
    Faculty address: 
    Ravila 14a, 50411 Tartu
  • matemaatika ja statistika instituut
    Faculty phone: 
    737 5860
    Faculty address: 
    J. Liivi 2, 50409 Tartu
  • molekulaar- ja rakubioloogia instituut
    Faculty phone: 
    737 5011
    Faculty address: 
    Riia 23, 23b–134, 51010 Tartu
  • Tartu observatoorium
    Faculty phone: 
    737 4510
    Faculty address: 
    Observatooriumi 1, Tõravere, 61602 Tartumaa
  • tehnoloogiainstituut
    Faculty phone: 
    737 4800
    Faculty address: 
    Nooruse 1, 50411 Tartu
  • ökoloogia ja maateaduste instituut
    Faculty phone: 
    737 5835
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Asutused
  • raamatukogu
    Faculty phone: 
    737 5702
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • teaduskool
    Faculty phone: 
    737 5581
    Faculty address: 
    Uppsala 10, 51003 Tartu
  • genoomika instituut
    Faculty phone: 
    737 4000
    Faculty address: 
    Riia 23b, 51010 Tartu
  • muuseum
    Faculty phone: 
    737 5674
    Faculty address: 
    Lossi 25, 51003 Tartu
  • loodusmuuseum ja botaanikaaed
    Faculty phone: 
    737 6076
    Faculty address: 
    Vanemuise 46, 51003 Tartu
Tugiüksused
  • ettevõtlus- ja innovatsioonikeskus
    Faculty phone: 
    737 6339
    Faculty address: 
    Lossi 3, III korrus, 51003 Tartu
  • grandikeskus
    Faculty phone: 
    737 6215
    Faculty address: 
    Lossi 3, III korrus, 51003 Tartu
  • hankeosakond
    Faculty phone: 
    737 6632
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • infotehnoloogia osakond
    Faculty phone: 
    737 6000, arvutiabi: 737 5500
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kantselei
    Faculty phone: 
    737 5606
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • kinnisvaraosakond
    Faculty phone: 
    737 5137
    Faculty address: 
    Ülikooli 18a, 51005 Tartu
  • personaliosakond
    Faculty phone: 
    737 5145
    Faculty address: 
    Ülikooli 18, ruumid 302 ja 304, 50090 Tartu
  • rahandusosakond
    Faculty phone: 
    737 5125
    Faculty address: 
    Jakobi 4, 51005 Tartu
  • rektoraadi büroo
    Faculty phone: 
    737 5600
    Faculty address: 
    Ülikooli 18, 51014 Tartu
  • siseauditi büroo
    Faculty address: 
    Ülikooli 17–103, 51005 Tartu
  • Tallinna esindus
    Faculty phone: 
    737 6600
    Faculty address: 
    Teatri väljak 3, 10143 Tallinn
  • turundus- ja kommunikatsiooniosakond
    Faculty phone: 
    737 5687
    Faculty address: 
    Ülikooli 18, ruumid 102, 104, 209, 210, 50090 Tartu
  • õppeosakond
    Faculty phone: 
    737 5620
    Faculty address: 
    Ülikooli 18, 50090 Tartu
  • üliõpilasesindus
    Faculty phone: 
    737 5400
    Faculty address: 
    Ülikooli 18b, 51005 Tartu
Muud üksused
  • MTÜ Tartu Ülikooli Akadeemiline Spordiklubi
    Faculty phone: 
    737 5371
    Faculty address: 
    Ujula 4, 51008 Tartu
  • MTÜ Tartu Üliõpilasküla
    Faculty phone: 
    740 9959
    Faculty address: 
    Narva mnt 25, 51013 Tartu
  • MTÜ Tartu Üliõpilasmaja
    Faculty phone: 
    730 2400
    Faculty address: 
    Kalevi 24, Tartu
  • OÜ Tartu Ülikooli Kirjastus
    Faculty phone: 
    737 5945
    Faculty address: 
    W. Struve 1, 50091 Tartu
  • SA Tartu Ülikooli Kliinikum
    Faculty phone: 
    731 8111
    Faculty address: 
    L. Puusepa 1a, 50406 Tartu
  • Tartu Ülikooli Sihtasutus
    Faculty phone: 
    737 5852
    Faculty address: 
    Ülikooli 18a–106, Tartu

Eesti Biokeskuse publikatsioonid 2001-2017

2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001

2017

1. Allebrandt KV, Teder-Laving M, Cusumano P, Frishman G, Levandovski R, Ruepp A, Hidalgo MPL, Costa R, Metspalu A, Roenneberg T, De Pittà C. „Identifying pathways modulating sleep duration: from genomics to transcriptomics“. Sci Rep. 2017 Jul 4;7(1):4555. doi: 10.1038/s41598-017-04027-7.

2. Anagnostou P, Dominici V, Battaggia C, Pagani L, Vilar M, Wells RS, Pettener D, Sarno S, Boattini A, Francalacci P, Colonna V, Vona G, Calò C, Destro Bisol G, Tofanelli S. „Overcoming the dichotomy between open and isolated populations using genomic data from a large European dataset“. Sci Rep. 2017 Feb 1;7:41614. doi: 10.1038/srep41614.

3. Behar DM, Saag L, Karmin M, Gover MG, Wexler JD, Sanchez LF, Greenspan E, Kushniarevich A, Davydenko O, Sahakyan H, Yepiskoposyan L, Boattini A, Sarno S, Pagani L, Carmi S, Tzur S, Metspalu E, Bormans C, Skorecki K, Metspalu M, Rootsi S, Villems R. „The genetic variation in the R1a clade among the Ashkenazi Levites' Y chromosome“. Sci Rep. 2017 Nov 2;7(1):14969. doi: 10.1038/s41598-017-14761-7.

4. Bortolini E, Pagani L, Crema ER, Sarno S, Barbieri C, Boattini A, Sazzini M, da Silva SG, Martini G, Metspalu M, Pettener D, Luiselli D, Tehrani JJ. „Inferring patterns of folktale diffusion using genomic data“. Proc Natl Acad Sci U S A. 2017 Aug 22;114(34):9140-9145. doi: 10.1073/pnas.1614395114. Epub 2017 Aug 7.

5. Bortolini E, Pagani L, Crema ER, Sarno S, Barbieri C, Boattini A, Sazzini M, da Silva SG, Martini G, Metspalu M, Pettener D, Luiselli D, Tehrani JJ. „Reply to d'Huy et al.: Navigating biases and charting new ground in the cultural diffusion of folktales“. Proc Natl Acad Sci U S A. 2017 Oct 10;114(41):E8556. doi: 10.1073/pnas.1715139114. Epub 2017 Oct 3.

6. Butcher L, Ahluwalia M, Örd T, Johnston J, Morris RH, Kiss-Toth E, Örd T, Erusalimsky JD. „Evidence for a role of TRIB3 in the regulation of megakaryocytopoiesis“. Sci Rep. 2017 Jul 27;7(1):6684. doi: 10.1038/s41598-017-07096-w.

7. Chaubey G, Ayub Q, Rai N, Prakash S, Mushrif-Tripathy V, Mezzavilla M, Pathak AK, Tamang R, Firasat S, Reidla M, Karmin M, Rani DS, Reddy AG, Parik J, Metspalu E, Rootsi S, Dalal K, Khaliq S, Mehdi SQ, Singh L, Metspalu M, Kivisild T, Tyler-Smith C, Villems R, Thangaraj K. „“Like sugar in milk“: reconstructing the genetic history of the Parsi population“. Genome Biol. 2017 Jun 14;18(1):110. doi: 10.1186/s13059-017-1244-9.

8. Chaubey G, Govindraj P, Rai N, van Driem G, Thangaraj K. „The genomewide analysis of Bhils: The second largest tribal population of India“. Man in India. 2017;97:279-290.

9. Chaubey G, Tamang R, Pennarun E, Dubey P, Rai N, Upadhyay RK, Meena RP, Patel JR, van Driem G, Thangaraj K, Metspalu M, Villems R. „Reconstructing the population history of the largest tribe of India: the Dravidian speaking Gond“. Eur J Hum Genet. 2017 Apr;25(4):493-498. doi: 10.1038/ejhg.2016.198. Epub 2017 Feb 1.

10. Eichstaedt CA, Pagani L, Antao T, Inchley CE, Cardona A, Mörseburg A, Clemente FJ, Sluckin TJ, Metspalu E, Mitt M, Mägi R, Hudjashov G, Metspalu M, Mormina M, Jacobs GS, Kivisild T. „Evidence of Early-Stage Selection on EPAS1 and GPR126 Genes in Andean High Altitude Populations“. Sci Rep. 2017 Oct 12;7(1):13042. doi: 10.1038/s41598-017-13382-4.

11. English BC, Van Prooyen N, Örd T, Örd T, Sil A. „The transcription factor CHOP, an effector of the integrated stress response, is required for host sensitivity to the fungal intracellular pathogen Histoplasma capsulatum“. PLoS Pathog. 2017 Sep 27;13(9):e1006589. doi: 10.1371/journal.ppat.1006589. eCollection 2017 Sep.

12. Galaverni M, Caniglia R, Pagani L, Fabbri E, Boattini A, Randi E. „Disentangling Timing of Admixture, Patterns of Introgression, and Phenotypic Indicators in a Hybridizing Wolf Population“. Mol Biol Evol. 2017 Sep 1;34(9):2324-2339. doi: 10.1093/molbev/msx169. 

13. Hudjashov G, Karafet TM, Lawson DJ, Downey S, Savina O, Sudoyo H, Lansing JS, Hammer MF, Cox MP. „Complex Patterns of Admixture across the Indonesian Archipelago“. Mol Biol Evol. 2017 Oct 1;34(10):2439-2452. doi: 10.1093/molbev/msx196.

14. Jagoda E, Lawson DJ, Wall JD, Lambert D, Muller C, Westaway M, Leavesley M, Capellini TD, Mirazón Lahr M, Gerbault P, Thomas MG, Migliano AB, Willerslev E, Metspalu M, Pagani L. „Disentangling Immediate Adaptive Introgression from Selection on Standing Introgressed Variation in Humans“. Mol Biol Evol. 2017 Dec 6. doi: 10.1093/molbev/msx314. [Epub ahead of print]

15. Kivisild T. „The study of human Y chromosome variation through ancient DNA“. Hum Genet. 2017 May;136(5):529-546. doi: 10.1007/s00439-017-1773-z. Epub 2017 Mar 4.

16. Pagani L. „A Cover Story for a Nature cover: genetic signature of human expansions into Eurasia revealed by a panel of worldwide high coverage genomes“. J Anthropol Sci. 2017 Dec 30;95:1-5. doi: 10.4436/JASS.95019. Epub 2017 Aug 7.

17. Posth C, Wißing C, Kitagawa K, Pagani L, van Holstein L, Racimo F, Wehrberger K, Conard NJ, Kind CJ, Bocherens H, Krause J. „Deeply divergent archaic mitochondrial genome provides lower time boundary for African gene flow into Neanderthals“. Nat Commun. 2017 Jul 4;8:16046. doi: 10.1038/ncomms16046.

18. Puustusmaa M, Kirsip H, Gaston K, Abroi A. „The Enigmatic Origin of Papillomavirus Protein Domains“. Viruses. 2017 Aug 23;9(9). pii: E240. doi: 10.3390/v9090240.

19. Saag L, Varul L, Scheib CL, Stenderup J, Allentoft ME, Saag L, Pagani L, Reidla M, Tambets K, Metspalu E, Kriiska A, Willerslev E, Kivisild T, Metspalu M. „Extensive Farming in Estonia Started through a Sex-Biased Migration from the Steppe“. Curr Biol. 2017 Jul 24;27(14):2185-2193.e6. doi: 10.1016/j.cub.2017.06.022. Epub 2017 Jul 14.

20. Sahakyan H, Hooshiar Kashani B, Tamang R, Kushniarevich A, Francis A, Costa MD, Pathak AK, Khachatryan Z, Sharma I, van Oven M, Parik J, Hovhannisyan H, Metspalu E, Pennarun E, Karmin M, Tamm E, Tambets K, Bahmanimehr A, Reisberg T, Reidla M, Achilli A, Olivieri A, Gandini F, Perego UA, Al-Zahery N, Houshmand M, Sanati MH, Soares P,14, Rai E, Šarac J,15, Šarić T, Sharma V, Pereira L, Fernandes V, Černý V, Farjadian S, Singh DP, Azakli H, Üstek D, Ekomasova Trofimova N, Kutuev I, Litvinov S, Bermisheva M, Khusnutdinova EK, Rai N, Singh M, Singh VK, Reddy AG, Tolk HV, Cvjetan S, Lauc LB, Rudan P, Michalodimitrakis EN, Anagnou NP, Pappa KI, Golubenko MV, Orekhov V, Borinskaya SA, Kaldma K, Schauer MA, Simionescu M, Gusar V, Grechanina E, Govindaraj P, Voevoda M, Damba L, Sharma S, Singh L, Semino O, Behar DM, Yepiskoposyan L, Richards MB, Metspalu M, Kivisild T, Thangaraj K, Endicott P, Chaubey G, Torroni A, Villems R. „Origin and spread of human mitochondrial DNA haplogroup U7“. Sci Rep. 2017 Apr 7;7:46044. doi: 10.1038/srep46044.

21. Sankovski E, Abroi A, Ustav M Jr, Ustav M. „Nuclear myosin 1 associates with papillomavirus E2 regulatory protein and influences viral replication“. Virology. 2018 Jan 15;514:142-155. doi: 10.1016/j.virol.2017.11.013. Epub 2018 Jan 4.

22. Sarno S, Boattini A, Pagani L, Sazzini M, De Fanti S, Quagliariello A, Gnecchi Ruscone GA, Guichard E, Ciani G, Bortolini E, Barbieri C, Cilli E, Petrilli R, Mikerezi I, Sineo L, Vilar M, Wells S, Luiselli D, Pettener D. „Ancient and recent admixture layers in Sicily and Southern Italy trace multiple migration routes along the Mediterranean“. Sci Rep. 2017 May 16;7(1):1984. doi: 10.1038/s41598-017-01802-4.

23. Vasar M, Andreson R, Davison J, Jairus T, Moora M, Remm M, Young JPW, Zobel M, Öpik M. „Increased sequencing depth does not increase captured diversity of arbuscular mycorrhizal fungi“. Mycorrhiza. 2017 Nov;27(8):761-773. doi: 10.1007/s00572-017-0791-y. Epub 2017 Jul 20.

24. Ord T, Ord T. „Mammalian Pseudokinase TRIB3 in Normal Physiology and Disease: Charting the Progress in Old and New Avenues“. Curr Protein Pept Sci. 2017;18(8):819-842. doi: 10.2174/1389203718666170406124547.

2016

1. Brucato N, Kusuma P, Cox MP, Pierron D, Purnomo GA, Adelaar A, Kivisild T, Letellier T, Sudoyo H, Ricaut FX. „Malagasy Genetic Ancestry Comes from an Historical Malay Trading Post in Southeast Borneo“. Mol Biol Evol. 2016 Sep;33(9):2396-400. doi: 10.1093/molbev/msw117. Epub 2016 Jul 5.

2. Chaubey G, Singh M, Rai N, Kariappa M, Singh K, Singh A, Pratap Singh D, Tamang R, Selvi Rani D, Reddy AG, Kumar Singh V, Singh L, Thangaraj K. „Genetic affinities of the Jewish populations of India“. Sci Rep. 2016 Jan 13;6:19166. doi: 10.1038/srep19166.

3. Harish A, Abroi A, Gough J, Kurland C. „Did Viruses Evolve As a Distinct Supergroup from Common Ancestors of Cells?“. Genome Biol Evol. 2016 Aug 27;8(8):2474-81. doi: 10.1093/gbe/evw175.

4. Ilumäe AM, Reidla M, Chukhryaeva M, Järve M, Post H, Karmin M, Saag Lauri, Agdzhoyan A, Kushniarevich A, Litvinov S, Ekomasova N, Tambets K, Metspalu E, Khusainova R, Yunusbayev B, Khusnutdinova EK, Osipova LP, Fedorova S, Utevska O, Koshel S, Balanovska E, Behar DM, Balanovsky O, Kivisild T, Underhill PA, Villems R, Rootsi S. „Human Y Chromosome Haplogroup N: A Non-trivial Time-Resolved Phylogeography that Cuts across Language Families“. Am J Hum Genet. 2016 Jul 7;99(1):163-73. doi: 10.1016/j.ajhg.2016.05.025.

5. Inchley CE, Larbey CD, Shwan NA, Pagani L, Saag Lauri, Antão T, Jacobs G, Hudjashov G, Metspalu E, Mitt M, Eichstaedt CA, Malyarchuk B, Derenko M, Wee J, Abdullah S, Ricaut FX, Mormina M, Mägi R, Villems R, Metspalu M, Jones MK, Armour JA, Kivisild T. „Selective sweep on human amylase genes postdates the split with Neanderthals“. Sci Rep. 2016 Nov 17;6:37198. doi: 10.1038/srep37198.

6. Kivi G, Teesalu K, Parik J, Kontkar E, Ustav M Jr, Noodla L, Ustav M, Männik A. „HybriFree: a robust and rapid method for the development of monoclonal antibodies from different host species“. BMC Biotechnol. 2016 Jan 8;16:2. doi: 10.1186/s12896-016-0232-6.

7. Malaspinas AS, Westaway MC, Muller C, Sousa VC, Lao O, Alves I, Bergström A, Athanasiadis G, Cheng JY, Crawford JE, Heupink TH, Macholdt E, Peischl S, Rasmussen S, Schiffels S, Subramanian S, Wright JL, Albrechtsen A, Barbieri C, Dupanloup I, Eriksson A, Margaryan A, Moltke I, Pugach I, Korneliussen TS, Levkivskyi IP, Moreno-Mayar JV, Ni S, Racimo F, Sikora M, Xue Y, Aghakhanian FA, Brucato N, Brunak S, Campos PF, Clark W, Ellingvåg S, Fourmile G, Gerbault P, Injie D, Koki G, Leavesley M, Logan B, Lynch A, Matisoo-Smith EA, McAllister PJ, Mentzer AJ, Metspalu M, Migliano AB, Murgha L, Phipps ME, Pomat W, Reynolds D, Ricaut FX, Siba P, Thomas MG, Wales T, Wall CM, Oppenheimer SJ, Tyler-Smith C, Durbin R, Dortch J, Manica A, Schierup MH, Foley RA, Lahr MM, Bowern C, Wall JD, Mailund T, Stoneking M, Nielsen R, Sandhu MS, Excoffier L, Lambert DM, Willerslev E. „A genomic history of Aboriginal Australia“. Nature. 2016 Oct 13;538(7624):207-214. doi: 10.1038/nature18299. Epub 2016 Sep 21.

8. Mallick S, Li H, Lipson M, Mathieson I, Gymrek M, Racimo F, Zhao M, Chennagiri N, Nordenfelt S, Tandon A, Skoglund P, Lazaridis I, Sankararaman S, Fu Q, Rohland N, Renaud G, Erlich Y, Willems T, Gallo C, Spence JP, Song YS, Poletti G, Balloux F, van Driem G, de Knijff P, Romero IG, Jha AR, Behar DM, Bravi CM, Capelli C, Hervig T, Moreno-Estrada A, Posukh OL, Balanovska E, Balanovsky O, Karachanak-Yankova S, Sahakyan H, Toncheva D, Yepiskoposyan L, Tyler-Smith C, Xue Y, Abdullah MS, Ruiz-Linares A, Beall CM, Di Rienzo A, Jeong C, Starikovskaya EB, Metspalu E, Parik J, Villems R, Henn BM, Hodoglugil U, Mahley R, Sajantila A, Stamatoyannopoulos G, Wee JT, Khusainova R, Khusnutdinova E, Litvinov S, Ayodo G, Comas D, Hammer MF, Kivisild T, Klitz W, Winkler CA, Labuda D, Bamshad M, Jorde LB, Tishkoff SA, Watkins WS, Metspalu M, Dryomov S, Sukernik R, Singh L, Thangaraj K, Pääbo S, Kelso J, Patterson N, Reich D. „The Simons Genome Diversity Project: 300 genomes from 142 diverse populations“. Nature. 2016 Oct 13;538(7624):201-206. doi: 10.1038/nature18964. Epub 2016 Sep 21.

9. Mark K, Saag L, Leavitt SD, Will-Wolf S, Nelsen MP, Torra T, Saag A, Randlane T, Lumbsch HT. „Evaluation of traditionally circumscribed species in the lichen-forming genus Usnea, section Usnea (Parmeliaceae, Ascomycota) using a six-locus dataset“. Organisms Diversity & Evolution. 2016;16(3):497-524. doi: 10.1007/s13127-016-0273-7.

10. Mishra A, Nizammuddin S, Basu Mallick C, Singh S, Prakash S, Siddiqui NA, Rai N, Carlus SJ, Sudhakar DV, Tripathi VP, Möls M, Kim-Howard X, Dewangan H, Mishra A, Reddy AG, Roy B, Pandey K, Chaubey G, Das P, Nath SK, Singh L, Thangaraj K. „Genotype-phenotype study of Middle Gangetic Plain in India reveals association of rs2470102 with skin pigmentation“.

J Invest Dermatol. 2016. [Epub ahead of print]

11. Mörseburg A, Pagani L, Ricaut FX, Yngvadottir B, Harney E, Castillo C, Hoogervorst T, Antao T, Kusuma P, Brucato N, Cardona A, Pierron D, Letellier T, Wee J, Abdullah S, Metspalu M, Kivisild T. „Multi-layered population structure in Island Southeast Asians“. Eur J Hum Genet. 2016 Nov;24(11):1605-1611. doi: 10.1038/ejhg.2016.60. Epub 2016 Jun 15.

12. Negi N, Tamang R, Pande V, Sharma A, Shah A, Reddy AG, Vishnupriya S, Singh L, Chaubey G, Thangaraj K. „The paternal ancestry of Uttarakhand does not imitate the classical caste system of India“. J Hum Genet. 2016 Feb;61(2):167-72. doi: 10.1038/jhg.2015.121. Epub 2015 Oct 29.

13. Pagani L, Lawson DJ, Jagoda E, Mörseburg A, Eriksson A, Mitt M, Clemente F, Hudjashov G, DeGiorgio M, Saag Lauri, Wall JD, Cardona A, Mägi R, Sayres MA, Kaewert S, Inchley C, Scheib CL, Järve M, Karmin M, Jacobs GS, Antao T, Iliescu FM, Kushniarevich A, Ayub Q, Tyler-Smith C, Xue Y, Yunusbayev B, Tambets K, Mallick CB, Saag Lehti, Pocheshkhova E, Andriadze G, Muller C, Westaway MC, Lambert DM, Zoraqi G, Turdikulova S, Dalimova D, Sabitov Z, Sultana GN, Lachance J, Tishkoff S, Momynaliev K, Isakova J, Damba LD, Gubina M, Nymadawa P, Evseeva I, Atramentova L, Utevska O, Ricaut FX, Brucato N, Sudoyo H, Letellier T, Cox MP, Barashkov NA, Škaro V, Mulahasanovic L, Primorac D, Sahakyan H, Mormina M, Eichstaedt CA, Lichman DV, Abdullah S, Chaubey G, Wee JT, Mihailov E, Karunas A, Litvinov S, Khusainova R, Ekomasova N, Akhmetova V, Khidiyatova I, Marjanović D, Yepiskoposyan L, Behar DM, Balanovska E, Metspalu A, Derenko M, Malyarchuk B, Voevoda M, Fedorova SA, Osipova LP, Lahr MM, Gerbault P, Leavesley M, Migliano AB, Petraglia M, Balanovsky O, Khusnutdinova EK, Metspalu E, Thomas MG, Manica A, Nielsen R, Villems R, Willerslev E, Kivisild T, Metspalu M. „Genomic analyses inform on migration events during the peopling of Eurasia“. Nature. 2016 Oct 13;538(7624):238-242. doi: 10.1038/nature19792. Epub 2016 Sep 21.

14. Pankratov V, Litvinov S, Kassian A, Shulhin D, Tchebotarev L, Yunusbayev B, Möls M, Sahakyan H, Yepiskoposyan L, Rootsi S, Metspalu E, Golubenko M, Ekomasova N, Akhatova F, Khusnutdinova E, Heyer E, Endicott P, Derenko M, Malyarchuk B, Metspalu M, Davydenko O, Villems R, Kushniarevich A. „East Eurasian ancestry in the middle of Europe: genetic footprints of Steppe nomads in the genomes of Belarusian Lipka Tatars“. Sci Rep. 2016 Jul 25;6:30197. doi: 10.1038/srep30197.

15. Puustusmaa M, Abroi A. „Conservation of the E8 CDS of the E8^E2 protein among mammalian papillomaviruses“. J Gen Virol. 2016 Sep;97(9):2333-45. doi: 10.1099/jgv.0.000526. Epub 2016 Jun 17.

16. Shan J, Zhang F, Sharkey J, Tang TA, Örd Tõnis, Kilberg MS. „The C/ebp-Atf response element (CARE) location reveals two distinct Atf4-dependent, elongation-mediated mechanisms for transcriptional induction of aminoacyl-tRNA synthetase genes in response to amino acid limitation“. Nucleic Acids Res. 2016 Nov 16;44(20):9719-9732. Epub 2016 Jul 28.

17. Singh S, Singh A, Rajkumar R, Sampath Kumar K, Kadarkarai Samy S, Nizamuddin S, Singh A, Ahmed Sheikh S, Peddada V, Khanna V, Veeraiah P, Pandit A, Chaubey G, Singh L, Thangaraj K. „Dissecting the influence of Neolithic demic diffusion on Indian Y-chromosome pool through J2-M172 haplogroup“. Sci Rep. 2016 Jan 12;6:19157. doi: 10.1038/srep19157.

18. Skoglund P, Posth C, Sirak K, Spriggs M, Valentin F, Bedford S, Clark GR, Reepmeyer C, Petchey F, Fernandes D, Fu Q, Harney E, Lipson M, Mallick S, Novak M, Rohland N, Stewardson K, Abdullah S, Cox MP, Friedlaender FR, Friedlaender JS, Kivisild T, Koki G, Kusuma P, Merriwether DA, Ricaut FX, Wee JT, Patterson N, Krause J, Pinhasi R, Reich D. „Genomic insights into the peopling of the Southwest Pacific“. Nature. 2016 Oct 27;538(7626):510-513. doi: 10.1038/nature19844. Epub 2016 Oct 3.

19. Šarac J, Šarić T, Havaš Auguštin D, Novokmet N, Vekarić N, Mustać M, Grahovac B, Kapović M, Nevajda B, Glasnović A, Missoni S, Rootsi S, Rudan P. „Genetic heritage of Croatians in the Southeastern European gene pool-Y chromosome analysis of the Croatian continental and Island population“. Am J Hum Biol. 2016 Nov;28(6):837-845. doi: 10.1002/ajhb.22876. Epub 2016 Jun 9.

20. Örd D, Örd Tiit, Biene T, Örd Tõnis. „TRIB3 increases cell resistance to arsenite toxicity by limiting the expression of the glutathione-degrading enzyme CHAC1“. Biochim Biophys Acta. 2016 Nov;1863(11):2668-2680. doi: 10.1016/j.bbamcr.2016.08.003. Epub 2016 Aug 12.

2015

1. Abdullah MS, Bravi CM, Capelli C, Hervig T, Wee JT, Tyler-Smith C, van Driem G, Romero IG, Jha AR, Karachanak-Yankova S, Toncheva D, Comas D, Henn B, Kivisild T, Ruiz-Linares A, Sajantila A, Metspalu E, Parik J, Villems R, Starikovskaya EB, Ayodo G, Beall CM, Di Rienzo A, Hammer M, Khusainova R, Khusnutdinova E, Klitz W, Winkler C, Labuda D, Metspalu M, Tishkoff SA, Dryomov S, Sukernik R, Patterson N, Reich D, Eichler EE. „Global diversity, population stratification, and selection of human copy number variation“. Science. 2015 Sep 11;349(6253):aab3761. doi: 10.1126/science.aab3761. Epub 2015 Aug 6.

2. Allentoft ME, Sikora M, Sjögren KG, Rasmussen S, Rasmussen M, Stenderup J, Damgaard PB, Schroeder H, Ahlström T, Vinner L, Malaspinas AS, Margaryan A, Higham T, Chivall D, Lynnerup N, Harvig L, Baron J, Della Casa P, Dąbrowski P, Duffy PR, Ebel AV, Epimakhov A, Frei K, Furmanek M, Gralak T, Gromov A, Gronkiewicz S, Grupe G, Hajdu T, Jarysz R, Khartanovich V, Khokhlov A, Kiss V, Kolář J, Kriiska A, Lasak I, Longhi C, McGlynn G, Merkevicius A, Merkyte I, Metspalu M, Mkrtchyan R, Moiseyev V, Paja L, Pálfi G, Pokutta D, Pospieszny Ł, Price TD, Saag L, Sablin M, Shishlina N, Smrčka V, Soenov VI, Szeverényi V, Tóth G, Trifanova SV, Varul L, Vicze M, Yepiskoposyan L, Zhitenev V, Orlando L, Sicheritz-Pontén T, Brunak S, Nielsen R, Kristiansen K, Willerslev E. „Population genomics of Bronze Age Eurasia“. Nature. 2015 Jun 11;522(7555):167-72. doi: 10.1038/nature14507.

3. Babu Gurramkonda V, Hussain Syed A, Murthy J, Chaubey G, Bhaskar Lakkakula VK. „Polymorphic variants near 1p22 and 20q11.2 loci and the risk of non-syndromic cleft lip and palate in South Indian population“. Int J Pediatr Otorhinolaryngol. 2015 Dec;79(12):2389-93. doi: 10.1016/j.ijporl.2015.10.055. Epub 2015 Nov 4.

4. Chaubey G, Kadian A, Bala S, Rao VR. „Genetic Affinity of the Bhil, Kol and Gond Mentioned in Epic Ramayana“. PLoS One. 2015 Jun 10;10(6):e0127655. doi: 10.1371/journal.pone.0127655. eCollection 2015.

5. De Fanti S, Barbieri C, Sarno S, Sevini F, Vianello D, Tamm E, Metspalu E, van Oven M, Hübner A, Sazzini M, Franceschi C, Pettener D, Luiselli D. „Fine Dissection of Human Mitochondrial DNA Haplogroup HV Lineages Reveals Paleolithic Signatures from European Glacial Refugia“. PLoS One. 2015 Dec 7;10(12):e0144391. doi: 10.1371/journal.pone.0144391. eCollection 2015.

6. Karmin M, Saag L, Vicente M, Wilson Sayres MA, Järve M, Talas UG, Rootsi S, Ilumäe AM, Mägi R, Mitt M, Pagani L, Puurand T, Faltyskova Z, Clemente F, Cardona A, Metspalu E, Sahakyan H, Yunusbayev B, Hudjashov G, DeGiorgio M, Loogväli EL, Eichstaedt C, Eelmets M, Chaubey G, Tambets K, Litvinov S, Mormina M, Xue Y, Ayub Q, Zoraqi G, Korneliussen TS, Akhatova F, Lachance J, Tishkoff S, Momynaliev K, Ricaut FX, Kusuma P, Razafindrazaka H, Pierron D, Cox MP, Sultana GN, Willerslev R, Muller C, Westaway M, Lambert D, Skaro V, Kovačevic L, Turdikulova S, Dalimova D, Khusainova R, Trofimova N, Akhmetova V, Khidiyatova I, Lichman DV, Isakova J, Pocheshkhova E, Sabitov Z, Barashkov NA, Nymadawa P, Mihailov E, Seng JW, Evseeva I, Migliano AB, Abdullah S, Andriadze G, Primorac D, Atramentova L, Utevska O, Yepiskoposyan L, Marjanovic D, Kushniarevich A, Behar DM, Gilissen C, Vissers L, Veltman JA, Balanovska E, Derenko M, Malyarchuk B, Metspalu A, Fedorova S, Eriksson A, Manica A, Mendez FL, Karafet TM, Veeramah KR, Bradman N, Hammer MF, Osipova LP, Balanovsky O, Khusnutdinova EK, Johnsen K, Remm M, Thomas MG, Tyler-Smith C, Underhill PA, Willerslev E, Nielsen R, Metspalu M, Villems R, Kivisild T. „A recent bottleneck of Y chromosome diversity coincides with a global change in culture“. GenomeRes. 2015 Apr;25(4):459-66. doi: 10.1101/gr.186684.114. Epub 2015 Mar 13.

7. Kushniarevich A, Utevska O, Chuhryaeva M, Agdzhoyan A, Dibirova K, Uktveryte I, Möls M, Mulahasanovic L, Pshenichnov A, Frolova S, Shanko A, Metspalu E, Reidla M, Tambets K, Tamm E, Koshel S, Zaporozhchenko V, Atramentova L, Kučinskas V, Davydenko O, Goncharova O, Evseeva I, Churnosov M, Pocheshchova E, Yunusbayev B, Khusnutdinova E, Marjanović D, Rudan P, Rootsi S, Yankovsky N, Endicott P, Kassian A, Dybo A; Genographic Consortium, Tyler-Smith C, Balanovska E, Metspalu M, Kivisild T, Villems R, Balanovsky O. „Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data“. PLoS One. 2015 Sep 2;10(9):e0135820. doi: 10.1371/journal.pone.0135820. eCollection 2015.

8. Negi N, Tamang R, Pande V, Sharma A, Shah A, Reddy AG, Vishnupriya S, Singh L, Chaubey G, Thangaraj K. „The paternal ancestry of Uttarakhand does not imitate the classical caste system of India“. J Hum Genet. 2016 Feb;61(2):167-72. doi: 10.1038/jhg.2015.121. Epub 2015 Oct 29.

9. Pala M, Soares P, Chaubey G and Richards MB. „Archaeogenetics“. The Cambridge World History. Ed. Graeme Barker and Candice Goucher. 1st ed. Vol. 2. Cambridge: Cambridge University Press, 2015;pp. 26-54. Cambridge Histories Online.

10. Pliss L, Timša L, Rootsi S, Tambets K, Pelnena I, Zole E, Puzuka A, Sabule A, Rozane S, Lace B, Kucinskas V, Krumina A, Ranka R, Baumanis V. „Y-Chromosomal Lineages of Latvians in the Context of the Genetic Variation of the Eastern-Baltic Region“. Ann Hum Genet. 2015 Nov;79(6):418-30. doi: 10.1111/ahg.12130. Epub 2015 Sep 28.

11. Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, Damgaard PB, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CP, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, Willerslev E. „POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans“. Science. 2015 Aug 21;349(6250):aab3884. doi: 10.1126/science.aab3884. Epub 2015 Jul 21.

12. Rasmussen S, Allentoft ME, Nielsen K, Orlando L, Sikora M, Sjögren KG, Pedersen AG, Schubert M, Van Dam A, Kapel CM, Nielsen HB, Brunak S, Avetisyan P, Epimakhov A, Khalyapin MV, Gnuni A, Kriiska A, Lasak I, Metspalu M, Moiseyev V, Gromov A, Pokutta D, Saag L, Varul L, Yepiskoposyan L, Sicheritz-Pontén T, Foley RA, Lahr MM, Nielsen R, Kristiansen K, Willerslev E. „Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago“. Cell. 2015 Oct 22;163(3):571-82. doi: 10.1016/j.cell.2015.10.009. Epub 2015 Oct 22.

13. Sudmant PH, Mallick S, Nelson BJ, Hormozdiari F, Krumm N, Huddleston J, Coe BP, Baker C, Nordenfelt S, Bamshad M, Jorde LB, Posukh OL, Sahakyan H, Watkins WS, Yepiskoposyan L, Abdullah MS, Bravi CM, Capelli C, Hervig T, Wee JT, Tyler-Smith C, van Driem G, Romero IG, Jha AR, Karachanak-Yankova S, Toncheva D, Comas D, Henn B, Kivisild T, Ruiz-Linares A, Sajantila A, Metspalu E, Parik J, Villems R, Starikovskaya EB, Ayodo G, Beall CM, Di Rienzo A, Hammer MF, Khusainova R, Khusnutdinova E, Klitz W, Winkler C, Labuda D, Metspalu M, Tishkoff SA, Dryomov S, Sukernik R, Patterson N, Reich D, Eichler EE. „Global diversity, population stratification, and selection of human copy-number variation“. Science. 2015 Sep 11;349(6253):aab3761. doi: 10.1126/science.aab3761. Epub 2015 Aug 6.

14. Sultana GN, Sharif MI, Asaduzzaman M, Chaubey G. „Evaluating the genetic impact of South and Southeast Asia on the peopling of Bangladesh“. Leg Med (Tokyo). 2015 Nov;17(6):446-50. doi: 10.1016/j.legalmed.2015.09.004. Epub 2015 Oct 8.

15. Utevska OM, Pshenichnov AS, Dibirova KhD, Rootsi S, Agdzhoyan AT, Churnosov MI, Balanovska EV, Atramentova LA,  Balanovsky OP. „Gene Pool Similarities and Differences between Ukrainians and Russians of Slobozhanshchina Based on YChromosome Data“. Tsitol Genet. 2015 Jul-Aug;49(4):40-50.

16. Underhill PA, Poznik GD, Rootsi S, Järve M, Lin AA, Wang J, Passarelli B, Kanbar J, Myres NM, King RJ, Di Cristofaro J, Sahakyan H, Behar DM, Kushniarevich A, Sarac J, Saric T, Rudan P, Pathak AK, Chaubey G, Grugni V, Semino O, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Balanovsky O, Khusnutdinova EK, Herrera RJ, Chiaroni J, Bustamante CD, Quake SR, Kivisild T, Villems R. „The phylogenetic and geographic structure of Y-chromosome haplogroup R1a“. Eur J Hum Genet. 2015 Jan;23(1):124-31. doi: 10.1038/ejhg.2014.50. Epub 2014 Mar 26.

17. Yunusbayev B, Metspalu M, Metspalu E, Valeev A, Litvinov S, Valiev R, Akhmetova V, Balanovska E, Balanovsky O, Turdikulova S, Dalimova D, Nymadawa P, Bahmanimehr A, Sahakyan H, Tambets K, Fedorova S, Barashkov N, Khidiyatova I, Mihailov E, Khusainova R, Damba L, Derenko M, Malyarchuk B, Osipova L, Voevoda M, Yepiskoposyan L, Kivisild T, Khusnutdinova E, Villems R. „The genetic legacy of the expansion of Turkic-speaking nomads across Eurasia“. PLoS Genet. 2015 Apr 21;11(4):e1005068. doi: 10.1371/journal.pgen.1005068. eCollection 2015 Apr.

2014

1. Cardona A, Pagani L, Antao T, Lawson DJ, Eichstaedt CA, Yngvadottir B, Shwe MT, Wee J, Romero IG, Raj S, Metspalu M, Villems R, Willerslev E, Tyler-Smith C, Malyarchuk BA, Derenko MV, Kivisild T. „Genome-wide analysis of cold adaptation in indigenous Siberian populations“. PLoS One. 2014 May 21;9(5):e98076. doi: 10.1371/journal.pone.0098076. eCollection 2014.

2. Chaubey G. „Language isolates and their genetic identity: a commentary on mitochondrial DNA history of Sri Lankan ethnic people: their relations within the island and with the Indian subcontinental populations“. J Hum Genet. 2014 Feb;59(2):61-3. doi: 10.1038/jhg.2013.122. Epub 2013 Nov 21.

3. Chaubey G, Singh M, Crivellaro F, Tamang R, Nandan A, Singh K, Sharma VK, Pathak AK, Shah AM, Sharma V, Singh VK, Selvi Rani D, Rai N, Kushniarevich A, Ilumäe AM, Karmin M, Phillip A, Verma A, Prank E, Singh VK, Li B, Govindaraj P, Chaubey AK, Dubey PK, Reddy AG, Premkumar K, Vishnupriya S, Pande V, Parik J, Rootsi S, Endicott P, Metspalu M, Lahr MM, van Driem G, Villems R, Kivisild T, Singh L, Thangaraj K. „Unravelling the distinct strains of Tharu ancestry“. Eur J Hum Genet. 2014 Dec;22(12):1404-12. doi: 10.1038/ejhg.2014.36. Epub 2014 Mar 26.

4. Juras A,  Dabert M,  Kushniarevich A, Malmstro H, Raghavan M,  Kosicki JZ,  Metspalu E,  Willerslev E, Piontek J. „Ancient DNA Reveals  Matrilineal Continuity in Present-Day Poland over  the Last Two Millennia“. PLoS One. 2014 Oct 22;9(10):e110839. doi: 10.1371/journal.pone.0110839. eCollection 2014.

5. Kovacevic L, Tambets K, Ilumäe AM, Kushniarevich A, Yunusbayev B, Solnik A, Bego T, Primorac D, Skaro V, Leskovac A, Jakovski Z, Drobnic K, Tolk HV, Kovacevic S, Rudan P, Metspalu E, Marjanovic D. „Standing at the Gateway to Europe - The Genetic Structure of Western Balkan Populations Based on Autosomal and Haploid Markers“. PLoS One. 2014 Aug 22;9(8):e105090. doi: 10.1371/journal.pone.0105090. eCollection 2014.

6. Lakkakula S, Pathapati RM, Chaubey G, Munirajan AK, Lakkakula BVKS, Maram R. „NAT2 genetic variations among South Indian populations“. Hum Genome Var. 2014 Oct 2;1:14014. doi: 10.1038/hgv.2014.14. eCollection 2014.

7. Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, Sudmant PH, Schraiber JG, Castellano S, Lipson M, Berger B, Economou C, Bollongino R, Fu Q, Bos KI, Nordenfelt S, Li H, de Filippo C, Prüfer K, Sawyer S, Posth C, Haak W, Hallgren F, Fornander E, Rohland N, Delsate D, Francken M, Guinet JM, Wahl J, Ayodo G, Babiker HA, Bailliet G, Balanovska E, Balanovsky O, Barrantes R, Bedoya G, Ben-Ami H, Bene J, Berrada F, Bravi CM, Brisighelli F, Busby GB, Cali F, Churnosov M, Cole DE, Corach D, Damba L, van Driem G, Dryomov S, Dugoujon JM, Fedorova SA, Gallego Romero I, Gubina M, Hammer M, Henn BM, Hervig T, Hodoglugil U, Jha AR, Karachanak-Yankova S, Khusainova R, Khusnutdinova E, Kittles R, Kivisild T, Klitz W, Kučinskas V, Kushniarevich A, Laredj L, Litvinov S, Loukidis T, Mahley RW, Melegh B, Metspalu E, Molina J, Mountain J, Näkkäläjärvi K, Nesheva D, Nyambo T, Osipova L,  Parik J, Platonov F, Posukh O, Romano V, Rothhammer F, Rudan I, Ruizbakiev R, Sahakyan H, Sajantila A, Salas A, Starikovskaya EB, Tarekegn A, Toncheva D, Turdikulova S, Uktveryte I, Utevska O, Vasquez R, Villena M, Voevoda M, Winkler CA, Yepiskoposyan L, Zalloua P, Zemunik T, Cooper A, Capelli C, Thomas MG, Ruiz-Linares A, Tishkoff SA, Singh L, Thangaraj K, Villems R, Comas D, Sukernik R, Metspalu M, Meyer M, Eichler EE, Burger J, Slatkin M, Pääbo S, Kelso J, Reich D, Krause J. „Ancient human genomes suggest three ancestral populations for present-day Europeans“. Nature. 2014 Sep 18;513(7518):409-13. doi: 10.1038/nature13673.

8. Raghavan M, DeGiorgio M, Albrechtsen A, Moltke I, Skoglund P, Korneliussen TS, Grønnow B, Appelt M, Gulløv HC, Friesen TM, Fitzhugh W, Malmström H, Rasmussen S, Olsen J, Melchior L, Fuller BT, Fahrni SM, Stafford T Jr, Grimes V, Renouf MA, Cybulski J, Lynnerup N, Lahr MM, Britton K, Knecht R, Arneborg J, Metspalu M, Cornejo OE, Malaspinas AS, Wang Y, Rasmussen M, Raghavan V, Hansen TV, Khusnutdinova E, Pierre T, Dneprovsky K, Andreasen C, Lange H, Hayes MG, Coltrain J, Spitsyn VA, Götherström A, Orlando L, Kivisild T, Villems R, Crawford MH, Nielsen FC, Dissing J, Heinemeier J, Meldgaard M, Bustamante C, O'Rourke DH, Jakobsson M, Gilbert MT, Nielsen R, Willerslev E. „The genetic prehistory of the New World Arctic“. Science. 2014 Aug 29;345(6200):1255832. doi: 10.1126/science.1255832.

9. Rai N, Taher N, Singh M, Chaubey G, Jha AN, Singh L, Thangaraj K. „Relic excavated in western India is probably of Georgian Queen Ketevan“. Mitochondrion. 2014 Jan;14(1):1-6. doi: 10.1016/j.mito.2013.12.002. Epub 2013 Dec 16.

10. Rasmussen M, Anzick SL, Waters MR, Skoglund P, DeGiorgio M, Stafford TW Jr, Rasmussen S, Moltke I, Albrechtsen A, Doyle SM, Poznik GD, Gudmundsdottir V, Yadav R, Malaspinas AS, White SS 5th, Allentoft ME, Cornejo OE, Tambets K, Eriksson A, Heintzman PD, Karmin M, Korneliussen TS, Meltzer DJ, Pierre TL, Stenderup J, Saag L, Warmuth VM, Lopes MC, Malhi RS, Brunak S, Sicheritz-Ponten T, Barnes I, Collins M, Orlando L, Balloux F, Manica A, Gupta R, Metspalu M, Bustamante CD, Jakobsson M, Nielsen R, Willerslev E. „The genome of a late Pleistocene humanfrom a Clovis site in vestern Montana“. Nature. 2014 Feb 13;506(7487):225-9. doi: 10.1038/nature13025.

11. Skoglund P, Malmström H, Omrak A, Raghavan M, Valdiosera C, Günther T, Hall P, Tambets K, Parik J, Sjögren KG, Apel J, Willerslev E, Storå J, Götherström A, Jakobsson M. „Genomic diversity and admixtire differs for Stone-Age Scandinavian foragers and farmers“. Science. 2014 May 16;344(6185):747-50. doi: 10.1126/science.1253448. Epub 2014 Apr 24.

12. Šarac J, Saric T, Augustin DH, Kovacevic L, Cvjetan S, Lewis AP, Metspalu E, Reidla M,  Novokmet N, Vidovic M, Nevajda B, Glasnovic A, Marjanovic D, Missoni S, Villems R,  Rudan P. „Maternal Genetic Heritage of Southeastern Europe Reveals a New Croatian Isolate and a Novel, Local Sub-Branching in the X2 Haplogroup“. Ann Hum Genet. 2014 May;78(3):178-94. doi: 10.1111/ahg.12056. Epub 2014 Mar 13.

13. Underhill PA, Poznik GD, Rootsi S, Järve M, Lin AA, Wang J, Passarelli B, Kanbar J, Myres NM, King RJ, Di Cristofaro J, Sahakyan H, Behar DM, Kushniarevich A, Sarac J, Saric T, Rudan P, Pathak AK, Chaubey G, Grugni V, Semino O, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Balanovsky O, Khusnutdinova EK, Herrera RJ, Chiaroni J, Bustamante CD, Quake SR, Kivisild T, Villems R. „The phylogenetic and geographic structure of Y-chromosome haplogroup R1a“. Eur J Hum Genet. 2015 Jan;23(1):124-31. doi: 10.1038/ejhg.2014.50. Epub 2014 Mar 26.

14. Yunusbayev B, Metspalu M, Metspalu E, Valeev A, Litvinov S, Valiev R, Akhmetova V,  Balanovska E, Balanovsky O, Turdikulova S, Dalimova D, Nymadawa P,  Bahmanimehr A, Sahakyan H, Tambets K, Fedorova S, Barashkov N, Khidiatova I, Mihailov E, Khusainova R, Damba L, Derenko M,  Malyarchuk B, Osipova L, Voevoda M, Yepiskoposyan L, Kivisild T, Khusnutdinova E, Villems R. „The Genetic Legacy of the Expansion of Turkic-Speaking Nomads Across Eurasia“. PLoS Genet. 2015 Apr 21;11(4):e1005068. doi: 10.1371/journal.pgen.1005068. eCollection 2015 Apr.

2013

1. Basu Mallick C, Illiescu M, Möls M, Hill S, Tamang R, Chaubey G, Ho S, Mascie-Taylor CGN, Callego Romano I, Crivellaro F, Hudjashov G, Metspalu M, Rai N, Pitchappian R, Singh L, Mizaron-Lahr M, Thangaraj K, Villems R, Kivisild T. „The light skin allele of  SLC24A5 gene in South Asians and Europeans shares identity by descents“. PLoS Genet. 2013 Nov;9(11):e1003912. doi: 10.1371/journal.pgen.1003912. Epub 2013 Nov 7.

2. Chaubey G, Endicott P. „The Andaman Islanders in a regional genetic context: Reexamining the evidence for an early peopling of the archipelago of South Asia“. Hum Biol. 2013 Feb-Jun;85(1-3):153-72.

3. Di Christofaro J, Pennarun E, Mazieres S, Meyres NM, Lin AA, Temori SA, Metspalu M, Metspalu E, Witzel M, King RJ, Underhill PA, Villems R, Chiaroni J. „Afghan Kindu Kush: where Eurasian sub-continent gene flows converge“. PLoS One. 2013 Oct 18;8(10):e76748. doi: 10.1371/journal.pone.0076748. eCollection 2013.

4. Fedorova SA, Reidla M, Metspalu E, Metspalu M, Rootsi S, Tambets K, Trofimova N, Zhadanov SI, Hooshiar Kashani R, Olivieri A, Osipova LP, Platonov FA, Tomsky MI, Khusnutdinova EK, Torroni A, Villems R. „Autosomal and uniparental portraits of the native populations of Sakha (Yakutia): implications for the peopling of Northeast Eurasia“. BMC Evol Biol. 2013 Jun 19;13:127. doi: 10.1186/1471-2148-13-127.

5. Hudjashov G, Villems R, Kivisild T. „Global patterns of diversity and selection in human tyrosinase gene“.  PLoS One. 2013 Sep 11;8(9):e74307. doi: 10.1371/journal.pone.0074307. eCollection 2013.

6. Kushniarevich A, Sivitskaya L, Danilenko N, Novogrodskii T, Tsybovsky I, Kiseleva A, Kotova S, Chaubey G, Metspalu E, Sahakyan H, Bahmeniamehr A, Reidla M, Rootsi S, Parik J, Reisberg T, Achilli A, Hooshiar Kashani B, Gandini F, Olivieri A, Behar DM, Torroni A, Davydenko O, Villems R. „Uniparental genetic heritage of Belarusians: encounter of rare Middle Eastern matrilineages with a central European mitochondrial DNA pool“. PLoS One. 2013 Jun 13;8(6):e66499. doi: 10.1371/journal.pone.0066499. Print 2013.

7. Migliano AB, Romero IG, Metspalu M, Leavesley M, Pagani L, Antao T, Huang DW, Sherman BT, Siddle K, Scholes C, Hudjashov G, Kaitokai E, Babalu A, Belatti M, Cagan A, Hopkinshaw B, Shaw C, Nelis M, Metspalu E, Mägi R, Lempicki RA, Villems R, Lahr MM, Kivisild T. „Evolution of of the pygmy genotype: evidence of positive selection from genome-wide scans in African, Asian and Melanesian pygmies“. Hum Biol. 2013 Feb-Jun;85(1-3):251-84.

8. Pshenichnov A, Balanovsky O, Utevskaya O, Metspalu E, Zaporozhchenko V, Agdzhyan A, Churnosov M, Atramenteva L, Balanovska E. „Genetic affinities of Ukrainians from maternal perspective“. Am J Phys Anthropol. 2013 Dec;152(4):543-50. doi: 10.1002/ajpa.22371. Epub 2013 Sep 30.

9. Raghavaran M, Skoglund P, Graf K, Metspalu M, Albrechtsen A, Moltke I, Rasmussen S, Stafford Jr T, Metspalu E, Karmin M, Tambets K, Rootsi S, Mägi R, Campos PF, Balanovska E, Balanovski O, Khusnutdinova E, Litvinov S, Osipova LP, Federova SA, Voevoda MJ, DeGriegio M, Sicheritz-Ponten T, Brunak S, Demeshchenko S, Kivisild T, Villems R, Nielsen R, Jakobsson M, Willeslev E. „Genome sequence of an Upper Palaeolithic Siberian reveals dual ancestry for Native Americans“. Nature. 2014 Jan 2;505(7481):87-91. doi: 10.1038/nature12736. Epub 2013 Nov 20.

10. Raj SM, Prakash PH, Lahr MM, Romero IG, Yadhav J, Iliescu FM, Raj N, Crivellaro F, Chaubey G, Villems R, Thangaraj K, Maniyappa K, Chandra HS, Kivisild T. „Variation at diabetes and obesity associates loci may mirror neutral patterns of human population diversity and diabetes prevalence in India“. Ann Hum Genet. 2013 Sep;77(5):392-408. doi: 10.1111/ahg.12028. Epub 2013 Jul 1. 

11. Rootsi S, Behar D, Järve M, Lin AA, Myres NM, Passarelli B, Poznik D, Tzu S, Sahakyan H, Kumar Pathak A, Metspalu M, Grugni V, Semino O, Metspalu E, Skorecki K, Villems R, Kivisild T, Underhill P. „Y-chromosome evidence unveils the cloaked Middle Eastern origin of Ashkenazi Levites“. Nature Commun. 2013. 

2012

1. Augustin, D. H.; Jeran, N.; Sarac, J.; Sarić, T.; Metspalu, E.; Reisberg, T.; Sujoldzić, A.; Villems, R.; Rudan, P. „Maternal genetic legacy of the eastern Adriatic island of Krk--an interplay of evolutionary forces and island's historical events in shaping the genetic structure of contemporary island population“. Coll Antropol. 2012 Jun;36(2):353-62.

2. Behar, D.; Oven, M.; Metspalu, M.; Loogväli, E-L.; Silva, N.; Kivisild, T.; Torroni, A.; Villems, R. „A “Copernican” reassessment of the human mitochondrial tree from its root“. Am J Hum Genet. 2012 Apr 6;90(4):675-84. doi: 10.1016/j.ajhg.2012.03.002.

3. Keller, A.; Graefen, A.; Ball, M.; Matzas, M.; Boisguerin, V.; Maixner, F.; Leidinger, P.; Backes, C.; Khairat, R.; Forster, M.; Stade, B.; Franke, A.; Mayer, J.; Spangler, J.; McLaughlin, S.; Shah, M.; Lee, C.; Harkins, T. T.; Sartori, A.; Moreno-Estrada, A.; Henn, B.; Sikora, M.; Semino, O.; Chiaroni, J.; Rootsi, S.; Myres, N. M.; Cabrera, V. M.; Underhill, P. A.; Bustamante, C. D.; Vigl, E. E.; Samadelli, M.; Cipollini, G.; Haas, J.; Katus, H.; O’Connor, B. D.; Carlson, M. R. J.; Meder, B.; Blin, N.; Meese, E.; Carsten M.; Pusch, C. M.; Zink, A. „New insights into the Tyrolean Iceman’s origin and phenotype as inferred by whole-genome sequencing“. Nat Commun. 2012 Feb 28;3:698. doi: 10.1038/ncomms1701.

4. Khusnutdinova, E. K.; Litvinov, S. S.; Kutuev, I. A.; Yunusbayev, B. B.; Khusainova, R. I.; Ahmetova, V. L.; Ahatova, F. S.; Metspalu, E.; Rootsi, S.; Villems, R. „Gene pool of ethnic groups of the Caucasus: Results of integrated study of the Y chromosome and mitochondrial DNA and genome-wide data“. Genetika. 2012 Jun;48(6):750-61.

5. Metspalu, M.; Romero, I. G.; Yunusbayev, B.; Chaubey, G.; Mallick, C. B; Hudjashov, G.; Nelis, M.; Mägi, R.; Metspalu, E.; Remm, M.; Pitchappan, R; Singh, L; Thangaraj, K; Villems, R.; Kivisild, T. „Shared and unique components of human population structure and genome-wide signals of positive selection in South Asia“. Am J Hum Genet. 2011 Dec 9;89(6):731-44. doi: 10.1016/j.ajhg.2011.11.010.

6. Pala, M.; Olivieri, A.; Achilli, A.; Acceturo, M.; Metspalu, E.; Reidla, M.; Tamm, E.; Karmin, M.; Reisberg, T.; Kashani, B.; Perego, U.; Carossa, V.; Gandini, F.; Pereira, J.; Soares, P.; Angerhofer, N.; Rychkov, S.; Al-Zahery, N.; Carelli, V.; Sanati, M.; Houshmand, M.; Hatina, J.; Macaulay, V.; Pereira, L.; Woodward, S.; Davies, W.; Gamble, C.; Baird, D.; Semino, O.; Villems, R.; Torroni, A.; Richards, M. „Mitochondrial DNA signals of Late Glacial re-colonisation of Europe from Near Eastern refugia“. Am J Hum Genet. 2012 May 4;90(5):915-24. doi: 10.1016/j.ajhg.2012.04.003.

7. Pennarun, E.; Kivisild, T.; Metspalu, E.; Metspalu, M.; Reisberg, T.; Behar, D.; Jones, S.; Villems, R. „Divorcing the Late Upper Palaeolithic Demographic Histories of mtDNA Haplogroup M1 and U6 in Africa“. BMC Evol Biol. 2012 Dec 3;12:234. doi: 10.1186/1471-2148-12-234.

8. Rai, N.; Chaubey, G.; Tamang, R.; Pathak, A.K.; Singh, V.K.; Karmin, M.; Singh, M.; Rani, D.S.; Anugula, S.; Yadav, B.K.; Singh,A.; Srinivasagan, R.; Yadav, A.; Kashyap, M.; Narvariya, S.; Reddy, A.G.; Underhill, P.A.; VillemsR.; Kivisild, T.; Singh, L.; Thangaraj, K. „The Phylogeography of Y-Chromosome Haplogroup H1a1a-M82 Reveals the Likely Indian Origin of the European Romani Populations“. PLoS One. 2012;7(11):e48477. doi: 10.1371/journal.pone.0048477. Epub 2012 Nov 28.

9. Romero, I.; Basu Mallick, C.; Liebert, A.; Crivellaro, F.; Chaubey, G.; Itan, Y.; Metspalu, M.; Eaaswarkhanth, M.; Pitchappa, R.; Villems, R.; Reich, D.; Singh, L.; Thangaraj, K.; Thomas, M.G., Swallow, D.M.; Lahr, M.M.; Kivisild, T. „Herders of Indian and European cattle share their predominant allele for lactase persistence“. Mol Biol Evol. 2012 Jan;29(1):249-60. doi: 10.1093/molbev/msr190. Epub 2011 Aug 11.

10. Rootsi, S.; Myres, N.M.; Lin, A.A.; Järve, M.; King, R.J.;Kutuev, I.; Cabrera, V.M.; Khusnutdinova, E.K.; Varendi, K.; Sahakyan, H.; Behar, D.; Khusainova, R.; Balanovsky, O.; Balanovska, E.; Rudan, P.; Yepiskoposyan, L.; Bahmanimehr, A.; Farjadian, S.; Kushniarevich, A.; Herrera, R.J.; Grugni, V.; Battaglia, V.; Nici, C.; Crobu, F.; Karachanak, S.; Kashani, B.H.; Houshmand, M.; Sanati, M.H.; Toncheva, D.; Lisa, A.; Semino, O.; Chiaroni, J.; Di Cristofaro, J.; Villems, R.; Kivisild, T.; Underhill, P. „Distinguishing the co-ancestries of haplogroup G Y-chromosomes in the populations of Europe and the Caucasus“. Eur J Hum Genet. 2012 Dec;20(12):1275-82. doi: 10.1038/ejhg.2012.86. Epub 2012 May 16.

11. Šarac, J.; Šaric, T.; Jeran, N.; Auguštin, D.; Metspalu, E.; Vekaric, N.; Missoni, S.; Villems, R.; Rudan, P. „Influence of evolutionary forces and demographic processes on the genetic structure of three Croatian populations: A maternal perspective“. Ann Hum Biol. 2012 Mar;39(2):143-55. doi: 10.3109/03014460.2012.660194.

12. Yunusbayev, B.; Metspalu, M.; Järve, M.; Kutujev, I.; Rootsi, S.; Metspalu, E.; Behar, D. M.; Varendi, K.; Sahakyan, H.; Khusainova, R.; Yepiskoposyan, L.; Khusnutdinova, E. K.; Underhill, P. A.; Kivisild, T.; Villems, R. „The Caucasus as an asymmetric semipermeable barrier to ancient human migrations“. Mol Biol Evol. 2012 Jan;29(1):359-65. doi: 10.1093/molbev/msr221. Epub 2011 Sep 13.

2011

1. Abroi A, Gough J. „Are viruses a source of new protein folds for organisms? - Virosphere structure space and evolution“. Bioessays. 2011 Aug;33(8):626-35. doi: 10.1002/bies.201000126. Epub 2011 Jun 1.

2. Chaubey G, Metspalu M, Choi Y, Mägi R, Irene Gallego Romero I, Soares P, van Oven M , Behar DM, Rootsi S, Hudjashov G, Mallick CB, Karmin M, Nelis M, Parik J, Goverdhana Reddy A, Metspalu E, van Driem G, Yali Xue Y, Tyler-Smith C, Thangaraj K, Singh L, Remm M, Richards MB, Lahr MM, Kayser M, Villems R, Kivisild T. „Population Genetic Structure in Indian Austroasiatic speakers: The Role of Landscape Barriers and Sex-specific Admixture“. Mol Biol Evol. 2011 Feb;28(2):1013-24. doi: 10.1093/molbev/msq288. Epub 2010 Oct 26.

3. Gallego Romero, I; Basu Mallick, C; Liebert, A; Crivellaro, F; Chaubey, G; Itan, Y; Metspalu, M; Eaaswarkhanth, M; Pitchappan, R; Villems, R; Reich, D; Singh, L; Thangaraj, K; Thomas, MG; Swallow, DM; Mirazon Lahr, M; Kivisild, T. „Herders of Indian and European Cattle Share Their Predominant Allele for Lactase Persistence“. Mol Biol Evol. 2012 Jan;29(1):249-60. doi: 10.1093/molbev/msr190. Epub 2011 Aug 11.

4. Myres, N.M.; Rootsi, S.; Lin, A.A.; Järve, M.; King, R.J.; Kutuev, I.; Cabrera, V.M.; Khusnutdinova, E.K.; Pshenichnov, A.; Yunusbayev, B.; Balanovsky, O.; Balanovska, E.; Rudan, P.; Baldovic, M.; Herrera, R.J.; Chiaroni, J.; Di Cristofaro, J.; Villems, R.; Kivisild, T.; Underhill, P.A. „A major Y-chromosome haplogroup R1b Holocene era founder effect in Central and Western Europe“. Eur J Hum Genet. 2011 Jan;19(1):95-101. doi: 10.1038/ejhg.2010.146. Epub 2010 Aug 25.

5. Primorac D, Marjanović D, Rudan P, Villems R, Underhill PA. „Croatian genetic heritage: Y-chromosome story“. Croat Med J. 2011 Jun;52(3):225-34.

6. Rasmussen, M.; Guo, X.; Wang, Y.; Lohmueller, K. E.; Rasmussen, S.; Albrechtsen, A.; Skotte, L.; Lindgreen, S.; Metspalu, M.; Jombart, T.; Kivisild, T.; Zhai, W.; Erikson, A.; Manica, A.; Orlando, L.; De La Vega, F.; Tridico, S.; Metspalu, E.; Nielsen, K.; Avila-Arcos, M.C.; Moreno-Mayar, J. V.; Muller, C.; Dortch, J.; Gilbert, M. T. P.; Lund, O.; Wesolowska, A.; Karmin, M.; Weinert, L. A.; Wang, B.; Li, J.; Tai, S.; Xiao, F.; Hanihara, T.; Driem, G.; Jha, A. R.; Ricaut, F-X.; Knijff, P.; Migliano, A. B.; Gallego-Romero, I.; Kristiansen, K.; Lambert, D. M.; Brunak, S.; Forster, P.; Brinkman, B.; Nehlich, O.; Bunce, M.; Richards, M.; Gupta, R.; Bustamante, C. D.; Krogh, A.; Foley, R. A.; Lahr, M.M.; Balloux, F.; Sicheritz-Ponten, T.; Villems, R.; Nielsen, R.; Jun, W.; Willerslev, E. „An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia“. Science. 2011 Oct 7;334(6052):94-8. doi: 10.1126/science.1211177. Epub 2011 Sep 22.

7. Scholes C, Siddle K, Ducourneau A, Crivellaro F, Järve M, Rootsi S, Bellatti M, Tabbada K, Mormina M, Reidla M, Villems R, Kivisild T, Lahr MM, Migliano AB. „Genetic diversity and evidence for population admixture in Batak Negritos from Palawan“. Am J Phys Anthropol. 2011 Sep;146(1):62-72. doi: 10.1002/ajpa.21544.

8. Yunusbayev B, Metspalu M, Järve M, Kutuev I, Rootsi S, Metspalu E, Behar DM, Varendi K, Sahakyan H, Khusainova R, Yepiskoposyan L, Khusnutdinova EK, Underhill PA, Kivisild T, Villems R. „The Caucasus as an asymmetric semipermeable barrier to ancient human migrations“. Mol Biol Evol. 2012 Jan;29(1):359-65. doi: 10.1093/molbev/msr221. Epub 2011 Sep 13.

2010

1. Behar DM, Yunusbayev B, Metspalu M, Metspalu E, Rosset S, Parik J, Rootsi S, Chaubey G, Kutuev I, Yudkovsky G, Khusnutdinova EK, Balanovsky O, Semino O, Pereira L, Comas D, Gurwitz D, Bonne-Tamir B, Parfitt T, Hammer MF, Skorecki K, Villems R. „The genome-wide structure of the Jewish people“. Nature. 2010 Jul 8;466(7303):238-42. doi: 10.1038/nature09103. Epub 2010 Jun 9.

2. Carraro V, Maurin AC, Lambert-Langlais S, Averous J, Chaveroux C, Parry L, Jousse C, Ord D, Ord T, Fafournoux P, Bruhat A. „Amino acid availability controls TRB3 transcription in liver through the GCN2/eIF2α/ATF4 pathway“. PLoS One. 2010 Dec 21;5(12):e15716. doi: 10.1371/journal.pone.0015716.

3. Rasmussen, M.; Li, Y.; Lindgreen, S.; Pedersen, J.S.; Albrechtsen, A.; Moltke, I.; Metspalu, M.; Metspalu, E.; Kivisild, T.; Gupta, R.; Bertalan, M.; Nielsen, K.; Gilbert, M.T.; Wang, Y.; Raghavan, M.; Campos, P.F.; Kamp, H.M.; Wilson, A.S.; Gledhill, A.; Tridico, S.; Bunce, M.; Lorenzen, E.D.; Binladen, J.; Guo, X.; Zhao, J.; Zhang, X.; Zhang, H.; Li, Z.; Chen, M.; Orlando, L.; Kristiansen, K.; Bak, M.; Tommerup, N.; Bendixen, C.; Pierre, T.L.; Gronnow, B.; Meldgaard, M.; Andreasen, C.; Fedorova, S.A.; Osipova, L.P.; Higham, T.F.; Ramsey, C.B.; Hansen, T.V.; Nielsen, F.C.; Crawford, M.H.; Brunak, S.; Sicheritz-Ponten, T.; Villems, R.; Nielsen, R.; Krogh, A.; Wang, J.; Willerslev, E. „Ancient human genome sequence of an extinct Palaeo-Eskimo“. Nature. 2010 Feb 11;463(7282):757-62. doi: 10.1038/nature08835.

4. Underhill, P.A.; Myres, N.M.; Rootsi, S.; Metspalu, M.; Zhivotovsky, L.A.; King, R.J.; Lin, A.A.; Chow, C.E.; Semino, O.; Battaglia, V.; Kutuev, I.; Järve, M.; Chaubey, G.; Ayub, Q.; Mohyuddin, A.; Mehdi, S.Q.; Sengupta, S.; Rogaev, E.I.; Khusnutdinova, E.K.; Pshenichnov, A.; Balanovsky, O.; Balanovska, E.; Jeran, N.; Augustin, D.H.; Baldovic, M.; Herrera, R.J.; Thangaraj, K.; Singh, V.; Singh, L.; Majumder, P.; Rudan, P.; Primorac, D.; Villems, R.; Kivisild, T. „Separating the post-Glacial coancestry of European and Asian Y chromosomes within haplogroup R1a“. Eur J Hum Genet. 2010 Apr;18(4):479-84. doi: 10.1038/ejhg.2009.194. Epub 2009 Nov 4.

2009

1. Bramanti B, Thomas MG, Haak W, Unterlaender M, Jores P, Tambets K, Antanaitis-Jacobs I, Haidle MN, Jankauskas R, Kind CJ, Lueth F, Terberger T, Hiller J, Matsumura S, Forster P, Burger J. „Genetic discontinuity between local hunter-gatherers and central Europe's first farmers“. Science. 2009 Oct 2;326(5949):137-40. doi: 10.1126/science.1176869. Epub 2009 Sep 3.

2. Endicott P, Ho SY, Metspalu M, Stringer C. „Evaluating the mitochondrial timescale of human evolution“. Trends Ecol Evol. 2009 Sep;24(9):515-21. doi: 10.1016/j.tree.2009.04.006. Epub 2009 Aug 12.

3. Järve M, Zhivotovsky LA, Rootsi S, Help H, Rogaev EI, Khusnutdinova EK, Kivisild T, Sanchez JJ. „Decreased Rate of Evolution in Y Chromosome STR Loci of Increased Size of the Repeat Unit“. PLoS One. 2009 Sep 30;4(9):e7276. doi: 10.1371/journal.pone.0007276.

4. Krjutškov K, Viltrop T, Palta P, Metspalu E, Tamm E, Suvi S, Sak K, Merilo A, Sork H, Teek R, Nikopensius T, Kivisild T, Metspalu A. „Evaluation of the 124-plex SNP typing microarray for forensic testing“. Forensic Sci Int Genet. 2009 Dec;4(1):43-8. doi: 10.1016/j.fsigen.2009.04.007. Epub 2009 May 15.

5. Loogväli EL, Kivisild T, Margus T, Villems R. „Explaining the Imperfection of the Molecular Clock of Hominid Mitochondria“. PLoS One. 2009 Dec 29;4(12):e8260. doi: 10.1371/journal.pone.0008260.

6. Martinovic Klaric I, Pericic Salihovic M, Barac Lauc L, Zhivotovsky L A, Rootsi S, Janicijevic, B.

„Dissecting the Molecular Architecture and origin of Bayash Romani Patrilineages: Genetic Influences From South-Asia and the Balkans“. Am J Phys Anthropol. 2009 Mar;138(3):333-42. doi: 10.1002/ajpa.20933.

7. Ottoni C, Martínez-Labarga C, Loogväli EL, Pennarun E, Achilli A, De Angelis F, Trucchi E, Contini I, Biondi G, Rickards O. „First Genetic Insight into Libyan Tuaregs: A Maternal Perspective“. Ann Hum Genet. 2009 Jul;73(Pt 4):438-48. doi: 10.1111/j.1469-1809.2009.00526.x. Epub 2009 May 20.

8. Pala M, Achilli A, Olivieri A, Kashani B H, Ugo A. Perego U A, Sanna D, Metspalu E, Tambets K, Tamm E, Accetturo M, Carossa V, Lancioni H, Panara F, Zimmermann B, Huber G, Al-Zahery N, Brisighelli F, Woodward S R, Francalacci P, Parson W, Salas A, Behar D M, Villems R, Semino O, Bandelt H J, Torroni A. „Mitochondrial Haplogroup U5b3: A Distant Echo of the Epipaleolithic in Italy and the Legacy of the Early Sardinians“. Am J Hum Genet. 2009 Jun;84(6):814-21. doi: 10.1016/j.ajhg.2009.05.004. Epub 2009 Jun 4.

9. Petraglia M, Clarkson C, Boivin N, Haslam M, Korisettar R, Chaubey G, Ditchfield P, Fuller D, James H, Jones S, Kivisild T, Koshy J, LahrM M, Metspalu M, Roberts R, ArnoldL L. „Population increase and environmental deterioration correspond with microlithic innovations in South Asia ca. 35,000 years ago“. Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12261-6. doi: 10.1073/pnas.0810842106. Epub 2009 Jul 20.

10. Shan J, Ord D, Ord T, Kilberg MS. „Elevated ATF4 expression, in the absence of other signals, is sufficient for transcriptional induction via CCAAT enhancer-binding protein-activating transcription factor response elements“. J Biol Chem. 2009 Aug 7;284(32):21241-8. doi: 10.1074/jbc.M109.011338. Epub 2009 Jun 9.

11. Ord T, Ord D, Kõivomägi M, Juhkam K, Ord T. „Human TRB3 is upregulated in stressed cells by the induction of translationally efficient mRNA containing a truncated 5'-UTR“. Gene. 2009 Sep 1;444(1-2):24-32. doi: 10.1016/j.gene.2009.06.001. Epub 2009 Jun 6.

2008

1. Barik SS, Sahani R, Prasad BV, Endicott P, Metspalu M, Sarkar BN, Bhattacharya S, Annapoorna PC, Sreenath J, Sun D, Sanchez JJ, Ho SY, Chandrasekar A, Rao VR. „Detailed mtDNA genotypes permit a reassessment of the settlement and population structure of the Andaman Islands“. Am J Phys Anthropol. 2008 May;136(1):19-27. doi: 10.1002/ajpa.20773.

2. Chaubey G, Karmin M, Metspalu E, Metspalu M, Selvi-Rani D, Singh VK, Parik J, Solnik A, Naidu BP, Kumar A, Adarsh N, Mallick CB, Trivedi B, Prakash S, Reddy R, Shukla P, Bhagat S, Verma S, Vasnik S, Khan I, Barwa A, Sahoo D, Sharma A, Rashid M, Chandra V, Reddy AG, Torroni A, Foley RA, Thangaraj K, Singh L, Kivisild T, Villems R. „Phylogeography of mtDNA haplogroup R7 in Indian Peninsula“. BMC Evol Biol. 2008 Aug 4;8:227. doi: 10.1186/1471-2148-8-227.

3. Chaubey G, Metspalu M, Karmin M, Thangaraj K, Rootsi S, Parik J, Solnik A, Rani DS, Singh VK, Naidu BP, Reddy AG, Metspalu E, Singh L, Kivisild T, Villems R. „Language shift by indigenous population:a model genetic study in South Asia“. Int J Hum Genet. 8:41-50.

4. Fedorova SA, Stepanov AD, Adojaan M, Parik J, Argunov VA, Ozawa T, Khusnutdinova EK, Villems R. „Phylogenetic analysis of ancient mitochondrial DNA lineages in human remains found in Yakutia“. Mol Biol (Mosk). 2008 May-Jun;42(3):445-53.

5. Gilbert MT, Kivisild T, Gronnow B, Andersen PK, Metspalu E, Reidla M, Tamm E, Axelsson E, Götherström A, Campos PF, Rasmussen M, Metspalu M, Higham TF, Schwenninger JL, Nathan R, De Hoog CJ, Koch A, Moller LN, Andreasen C, Meldgaard M, Villems R, Bendixen C, Willerslev E. Paleo-Eskimo mtDNA genome reveals matrilineal discontinuity in Greenland. Science. 2008 Jun 27;320(5884):1787-9. doi: 10.1126/science.1159750. Epub 2008 May 29.

6. Pierron D, Rocher C, Amati-Bonneau P, Reynier P, Martin Negrier ML, Allouche S, Batandier C, de Camaret BM, Godinot C, Roting A, Feldmann D, Bellanne-Chantelot C, Arveiler B, Pennarun E, Rossignol R, Crouzet M, Murail P, Thoraval D, Letellier T. „New evidence of a mitochondrial genetic background paradox: impact of the J haplogroup on the A3243G mutation“. BMC Med Genet. 2008 May 7;9:41. doi: 10.1186/1471-2350-9-41.

7. Soares P, Trejaut JA, Loo JH, Hill C, Mormina M, Lee CL, Chen YM, Hudjašhov G, Forster P, Macaulay V, Bulbeck D, Oppenheimer S, Lin M, Richards MB. „Climate change and postglacial human dispersals in Southeast Asia“. Mol Biol Evol. 2008 Jun;25(6):1209-18. doi: 10.1093/molbev/msn068. Epub 2008 Mar 21.

8. Thangaraj K, Chaubey G, Kivisild T, Selvi-Rani D, Singh VK, Ismail T, Carvalho-Silva D, Metspalu M, Bhaskar LV, Reddy AG, Chandra S, Pande V, Prathap Naidu B, Adarsh N, Verma A, Jyothi TA, Mallick CB, Shrivastava N, Devasena R, Kumari B, Singh AK, Dwivedi SK, Singh S, Rao G, Gupta P, Sonvane V, Kumari K, Basha A, Bhargavi KR, Lalremruata A, Gupta AK, Kaur G, Reddy KK, Rao AP, Villems R, Tyler-Smith C, Singh L. „Maternal footprints of Southeast Asians in North India“. Hum Hered. 2008;66(1):1-9. doi: 10.1159/000114160. Epub 2008 Jan 28.

2007

1. Rootsi S, Zhivotovsky LA, Baldovic M, Kayser M, Kutuev IA, Khusainova R, Bermisheva MA, Gubina M, Fedorova SA, Ilumäe AM, Khusnutdinova EK, Voevoda MI, Osipova LP, Stoneking M, Lin AA, Ferak V, Parik J, Kivisild T, Underhill PA, Villems R. „A counter-clockwise northern route of the Y-chromosome haplogroup N from Southeast Asia towards Europe“. Eur J Hum Genet. 2007 Feb;15(2):204-11. Epub 2006 Dec 6.

2. Richard C, Pennarun E, Kivisild T, Tambets K, Tolk HV, Metspalu E, Reidla M, Chevalier S, Giraudet S, Lauc LB, Pericić M, Rudan P, Claustres M, Journel H, Dorval I, Müller C, Villems R, Chaventré A, Moisan JP. „An mtDNA perspective of French genetic variation“. Ann Hum Biol. 2007 Jan-Feb;34(1):68-79.

3. Tamm E, Kivisild T, Reidla M, Metspalu M, Smith DG, Mulligan CJ, Bravi CM, Rickards O, Martinez-Labarga C, Khusnutdinova EK, Fedorova SA, Golubenko MV, Stepanov VA, Gubina MA, Zhadanov SI, Ossipova LP, Damba L, Voevoda MI, Dipierri JE, Villems R, Malhi RS. „Beringian standstill and spread of Native American founders“. PLoS One. 2007 Sep 5;2(9):e829.

4. Adojaan M, Mölder T, Männik A, Kivisild T, Villems R, Krispin T, Ustav M. „High prevalence of the CCR5Delta32 HIV-resistance mutation among Estonian HIV type 1-infected individuals“. AIDS Res Hum Retroviruses. 2007 Feb;23(2):193-7.

5. Achilli A, Olivieri A, Pala M, Metspalu E, Fornarino S, Battaglia V, Accetturo M, Kutuev I, Khusnutdinova E, Pennarun E, Cerutti N, Di Gaetano C, Crobu F, Palli D, Matullo G, Santachiara-Benerecetti AS, Cavalli-Sforza LL, Semino O, Villems R, Bandelt HJ, Piazza A, Torroni A. „Mitochondrial DNA variation of modern Tuscans supports the near eastern origin of Etruscans“. Am J Hum Genet. 2007 Apr;80(4):759-68. Epub 2007 Feb 6.

6. Roostalu U, Kutuev I, Loogväli EL, Metspalu E, Tambets K, Reidla M, Khusnutdinova EK, Usanga E, Kivisild T, Villems R. „Origin and expansion of haplogroup H, the dominant human mitochondrial DNA lineage in West Eurasia: the Near Eastern and Caucasian perspective“. Mol Biol Evol. 2007 Feb;24(2):436-48. Epub 2006 Nov 10.

7. Chaubey G, Metspalu M, Kivisild T, Villems R. „Peopling of South Asia: investigating the caste-tribe continuum in India“. Bioessays. 2007 Jan;29(1):91-100.

8. Derenko M, Malyarchuk B, Grzybowski T, Denisova G, Dambueva I, Perkova M, Dorzhu C, Luzina F, Lee HK, Vanecek T, Villems R, Zakharov I. „Phylogeographic analysis of mitochondrial DNA in northern Asian populations“. Am J Hum Genet. 2007 Nov;81(5):1025-41. Epub 2007 Oct 1.

9. Hudjashov G, Kivisild T, Underhill PA, Endicott P, Sanchez JJ, Lin AA, Shen P, Oefner P, Renfrew C, Villems R, Forster P. „Revealing the prehistoric settlement of Australia by Y chromosome and mtDNA analysis“. Proc Natl Acad Sci U S A. 2007 May 22;104(21):8726-30. Epub 2007 May 11.

10. Ord D, Meerits K, Ord T. „TRB3 protects cells against the growth inhibitory and cytotoxic effect of ATF4“. Exp Cell Res. 2007 Oct 1;313(16):3556-67. Epub 2007 Jul 25.

11. Rosa A, Ornelas C, Jobling MA, Brehm A, Villems R. „Y-chromosomal diversity in the population of Guinea-Bissau: a multiethnic perspective“. BMC Evol Biol. 2007 Jul 27;7:124.

2006

1. Behar DM, Metspalu E, Kivisild T, Achilli A, Hadid Y, Tzur S, Pereira L, Amorim A, Quintana-Murci L, Majamaa K, Herrnstadt C, Howell N, Balanovsky O, Kutuev I, Pshenichnov A, Gurwitz D, Bonne-Tamir B, Torroni A, Villems R, Skorecki K. „The matrilineal ancestry of Ashkenazi Jewry: portrait of a recent founder event“. Am J Hum Genet. 2006 Mar;78(3):487-97. Epub 2006 Jan 11.

2. Pliss L, Tambets K, Loogväli EL, Pronina N, Lazdins M, Krumina A, Baumanis V, Villems R. „Mitochondrial DNA portrait of Latvians: towards the understanding of the genetic structure of Baltic-speaking populations“. Ann Hum Genet. 2006 Jul;70(Pt 4):439-58.

3. Rosa A, Ornelas C, Brehm A, Villems R. „Population data on 11 Y-chromosome STRs from Guiné-Bissau“. Forensic Sci Int. 2006 Mar 10;157(2-3):210-7.

4. Sahoo S, Singh A, Himabindu G, Banerjee J, Sitalaximi T, Gaikwad S, Trivedi R, Endicott P, Kivisild T, Metspalu M, Villems R, Kashyap VK. „A prehistory of Indian Y chromosomes: evaluating demic diffusion scenarios“. Proc Natl Acad Sci U S A. 2006 Jan 24;103(4):843-8. Epub 2006 Jan 13.

2005

1. Adojaan M, Kivisild T, Männik A, Krispin T, Ustina V, Zilmer K, Liebert E, Jaroslavtsev N, Priimägi L, Tefanova V, Schmidt J, Krohn K, Villems R, Salminen M, Ustav M. „Predominance of a rare type of HIV-1 in Estonia“. J Acquir Immune Defic Syndr. 2005 Aug 15;39(5):598-605.

2. Babalini C, Martínez-Labarga C, Tolk HV, Kivisild T, Giampaolo R, Tarsi T, Contini I, Barać L, Janićijević B, Martinović Klarić I, Pericić M, Sujoldzić A, Villems R, Biondi G, Rudan P, Rickards O. „The population history of the Croatian linguistic minority of Molise (southern Italy): a maternal view“. Eur J Hum Genet. 2005 Aug;13(8):902-12.

3. Bermisheva MA, Kutuev IA, Spitsyn VA, Villems R, Batyrova AZ, Korshunova TIu, Khusnutdinova EK. „Analysis of mitochondrial DNA variation in the population of Oroks“. Genetika. 2005 Jan;41(1):78-84.

4. Goltsova TV, Osipova LP, Zhadanov SI, Villems R. „The effect of marriage migration on the genetic structure of the Taimyr Nganasan population: genealogical analysis inferred from MtDNA markers“. Genetika. 2005 Jul;41(7):954-65.

5. Haak W, Forster P, Bramanti B, Matsumura S, Brandt G, Tänzer M, Villems R, Renfrew C, Gronenborn D, Alt KW, Burger J. „Ancient DNA from the first European farmers in 7500-year-old Neolithic sites“. Science. 2005 Nov 11;310(5750):1016-8.

6. Pericić M, Lauc LB, Klarić IM, Rootsi S, Janićijevic B, Rudan I, Terzić R, Colak I, Kvesić A, Popović D, Sijacki A, Behluli I, Dordevic D, Efremovska L, Bajec DD, Stefanović BD, Villems R, Rudan P. „High-resolution phylogenetic analysis of southeastern Europe traces major episodes of paternal gene flow among Slavic populations“. Mol Biol Evol. 2005 Oct;22(10):1964-75. Epub 2005 Jun 8.

2004

1. Achilli A, Rengo C, Magri C, Battaglia V, Olivieri A, Scozzari R, Cruciani F, Zeviani M, Briem E, Carelli V, Moral P, Dugoujon JM, Roostalu U, Loogväli EL, Kivisild T, Bandelt HJ, Richards M, Villems R, Santachiara-Benerecetti AS, Semino O, Torroni A. „The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool“. Am J Hum Genet. 2004 Nov;75(5):910-8. Epub 2004 Sep 20.

2. Abroi A, Ilves I, Kivi S, Ustav M. „Analysis of chromatin attachment and partitioning functions of bovine papillomavirus type 1 E2 protein“. J Virol. 2004 Feb;78(4):2100-13.

3. Bermisheva MA, Kutuev IA, Korshunova TIu, Dubova NA, Villems R, Khusnutdinova EK. „Phylogeografic analysis of mitochondrial DNA Nogays: the high level of mixture of maternal lineages from Eastern and Western Eurasia“. Mol Biol (Mosk). 2004 Jul-Aug;38(4):617-24.

4. Cvjetan S, Tolk HV, Lauc LB, Colak I, Dordević D, Efremovska L, Janićijević B, Kvesić A, Klarić IM, Metspalu E, Pericić M, Parik J, Popović D, Sijacki A, Terzić R, Villems R, Rudan P. „Frequencies of mtDNA haplogroups in southeastern Europe--Croatians, Bosnians and Herzegovinians, Serbians, Macedonians and Macedonian Romani“. Coll Antropol. 2004 Jun;28(1):193-8.

5. Loogväli EL, Roostalu U, Malyarchuk BA, Derenko MV, Kivisild T, Metspalu E, Tambets K, Reidla M, Tolk HV, Parik J, Pennarun E, Laos S, Lunkina A, Golubenko M, Barac L, Pericic M, Balanovsky OP, Gusar V, Khusnutdinova EK, Stepanov V, Puzyrev V, Rudan P, Balanovska EV, Grechanina E, Richard C, Moisan JP, Chaventré A, Anagnou NP, Pappa KI, Michalodimitrakis EN, Claustres M, Gölge M, Mikerezi I, Usanga E, Villems R. „Disuniting uniformity: a pied cladistic canvas of mtDNA haplogroup H in Eurasia“. Mol Biol Evol. 2004 Nov;21(11):2012-21. Epub 2004 Jul 14.

6. Kivisild T, Reidla M, Metspalu E, Rosa A, Brehm A, Pennarun E, Parik J, Geberhiwot T, Usanga E, Villems R. „Ethiopian mitochondrial DNA heritage: tracking gene flow across and around the gate of tears“. Am J Hum Genet. 2004 Nov;75(5):752-70. Epub 2004 Sep 27.

7. Metspalu M, Kivisild T, Metspalu E, Parik J, Hudjashov G, Kaldma K, Serk P, Karmin M, Behar DM, Gilbert MT, Endicott P, Mastana S, Papiha SS, Skorecki K, Torroni A, Villems R. „Most of the extant mtDNA boundaries in south and southwest Asia were likely shaped during the initial settlement of Eurasia by anatomically modern humans“. BMC Genet. 2004 Aug 31;5:26.

8. Rootsi S, Magri C, Kivisild T, Benuzzi G, Help H, Bermisheva M, Kutuev I, Barać L, Pericić M, Balanovsky O, Pshenichnov A, Dion D, Grobei M, Zhivotovsky LA, Battaglia V, Achilli A, Al-Zahery N, Parik J, King R, Cinnioğlu C, Khusnutdinova E, Rudan P, Balanovska E, Scheffrahn W, Simonescu M, Brehm A, Goncalves R, Rosa A, Moisan JP, Chaventre A, Ferak V, Füredi S, Oefner PJ, Shen P, Beckman L, Mikerezi I, Terzić R, Primorac D, Cambon-Thomsen A, Krumina A, Torroni A, Underhill PA, Santachiara-Benerecetti AS, Villems R, Semino O. „Phylogeography of Y-chromosome haplogroup I reveals distinct domains of prehistoric gene flow in europe“. Am J Hum Genet. 2004 Jul;75(1):128-37. Epub 2004 May 25.

9. Rosa A, Brehm A, Kivisild T, Metspalu E, Villems R. „MtDNA profile of West Africa Guineans: towards a better understanding of the Senegambia regioon“. Ann Hum Genet. 2004 Jul;68(Pt 4):340-52.

10. Tambets K, Rootsi S, Kivisild T, Help H, Serk P, Loogväli EL, Tolk HV, Reidla M, Metspalu E, Pliss L, Balanovsky O, Pshenichnov A, Balanovska E, Gubina M, Zhadanov S, Osipova L, Damba L, Voevoda M, Kutuev I, Bermisheva M, Khusnutdinova E, Gusar V, Grechanina E, Parik J, Pennarun E, Richard C, Chaventre A, Moisan JP, Barác L, Pericić M, Rudan P, Terzić R, Mikerezi I, Krumina A, Baumanis V, Koziel S, Rickards O, De Stefano GF, Anagnou N, Pappa KI, Michalodimitrakis E, Ferák V, Füredi S, Komel R, Beckman L, Villems R. „The western and eastern roots of the Saami--the story of genetic "outliers" told by mitochondrial DNA and Y chromosomes“. Am J Hum Genet. 2004 Apr;74(4):661-82. Epub 2004 Mar 11. 

2003

Bandelt HJ, Herrnstadt C, Yao YG, Kong QP, Kivisild T, Rengo C, Scozzari R, Richards M, Villems R, Macaulay V, Howell N, Torroni A, Zhang YP. „Identification of Native American founder mtDNAs through the analysis of complete mtDNA sequences: some caveats“. Ann Hum Genet. 2003 Nov;67(Pt 6):512-24.

Barać L, Pericić M, Klarić IM, Rootsi S, Janićijević B, Kivisild T, Parik J, Rudan I, Villems R, Rudan P. „Y chromosomal heritage of Croatian population and its island isolates“. Eur J Hum Genet. 2003 Jul;11(7):535-42.

Fedorova SA, Bermisheva MA, Villems R, Maksimova NR, Khusnutdinova EK. „Analysis of mitochondrial DNA lineages in Yakuts“. BMC Evol Biol. 2013 Jun 19;13:127. doi: 10.1186/1471-2148-13-127.

Gonçalves R, Rosa A, Freitas A, Fernandes A, Kivisild T, Villems R, Brehm A. „Y-chromosome lineages in Cabo Verde Islands witness the diverse geographic origin of its first male settlers“. Hum Genet. 2003 Nov;113(6):467-72. Epub 2003 Aug 26.

Kivisild T, Rootsi S, Metspalu M, Mastana S, Kaldma K, Parik J, Metspalu E, Adojaan M, Tolk HV, Stepanov V, Gölge M, Usanga E, Papiha SS, Cinnioğlu C, King R, Cavalli-Sforza L, Underhill PA, Villems R. „The genetic heritage of the earliest settlers persists both in Indian tribal and caste populations“. Am J Hum Genet. 2003 Feb;72(2):313-32. Epub 2003 Jan 20.

Reidla M, Kivisild T, Metspalu E, Kaldma K, Tambets K, Tolk HV, Parik J, Loogväli EL, Derenko M, Malyarchuk B, Bermisheva M, Zhadanov S, Pennarun E, Gubina M, Golubenko M, Damba L, Fedorova S, Gusar V, Grechanina E, Mikerezi I, Moisan JP, Chaventré A, Khusnutdinova E, Osipova L, Stepanov V, Voevoda M, Achilli A, Rengo C, Rickards O, De Stefano GF, Papiha S, Beckman L, Janicijevic B, Rudan P, Anagnou N, Michalodimitrakis E, Koziel S, Usanga E, Geberhiwot T, Herrnstadt C, Howell N, Torroni A, Villems R. „Origin and diffusion of mtDNA haplogroup X“. Am J Hum Genet. 2003. 73(5):1178-90.

2002

1. Bermisheva M, Tambets K, Villems R, Khusnutdinova E. „Diversity of mitochondrial DNA haplogroups in ethnic populations of the Volga-Ural regioon“. Mol Biol (Mosk). 2002 Nov-Dec;36(6):990-1001.

2. Forster P, Calì F, Röhl A, Metspalu E, D'Anna R, Mirisola M, De Leo G, Flugy A, Salerno A, Ayala G, Kouvatsi A, Villems R, Romano V. „Continental and subcontinental distributions of mtDNA control region types“. Int J Legal Med. 2002 Apr;116(2):99-108.

3. Kivisild T, Tolk HV, Parik J, Wang Y, Papiha SS, Bandelt HJ, Villems R. „The emerging limbs and twigs of the East Asian mtDNA tree“. Mol Biol Evol. 2002. 19(10):1737-51.

4. Metspalu A. „Estonian Genome Project--before the take-off and take-off“. Bioinformatics. 2002;18 Suppl 2:S152.

5. Metspalu E, Reidla M, Parik J, Kivisild T, Tambets K, Usanga E, Villems R. „Human mitochondrial DNA diversity in the Near and Middle East and in northeastern Africa: a phylogeographic approach“. European Journal of Human Genetics. 2002 May;(10):72-73.

6. Moisan JP, Pennarun E, Tambets K, Villems R, Chaventre A. „Maternal legacy of Bretons reveals common features with the extant Scottish mtDNA“. European Journal of Human Genetics. 2002 May;(10):184-184.

7. Männik A, Rünkorg K, Jaanson N, Ustav M, Ustav E. „Induction of the bovine papillomavirus origin "onion skin"-type DNA replication at high E1 protein concentrations in vivo“. J Virol. 2002 Jun;76(11):5835-45.

8. Pennarun E, Metspalu E, Kivisild T, El Amri H, El Kabbaj S, Chaventre A, Villems R, Moisan JP. „A comprehensive analysis of Arab and Berber maternal lineages in Morocco“. European Journal of Human Genetics. 2002 May;(10):184-184.

9. Rosa A, Metspalu E, Macaulay V, Brehm A. „The presence of the western Eurasian mtDNA haplogroup U5 in sub-Saharan Africans“. European Journal of Human Genetics. 2002 May;(10):186-186.

10. Stepanov VA, Puzyrev V, Kivisild T, Kharkov V, Spiridonova M, Rootsi S, Khitrinskaya I, Villems R. „Phylogeography of Y chromosome lineages in the Old World“. European Journal of Human Genetics“. 2002 May:10(180-180).

11. Tammur J, Sibul H, Ustav E, Ustav M, Metspalu A. „A bovine papillomavirus-1 based vector restores the function of the low-density lipoprotein receptor in the receptor-deficient CHO-ldlA7 cell line“. BMC Mol Biol. 2002 Apr 19;3:5. Epub 2002 Apr 19.

12. Tolk HV, Pericic M, Barac L, Cvjetan S, Rudan P, Tambets K, Villems R. „The phylogeographic context of the Southern Slavs: A mitochondrial perspective“. 2002 May;(10):184-184.

2001

1. Allikas A, Ord D, Kurg R, Kivi S, Ustav M. „Roles of the hinge region and the DNA binding domain of the bovine papillomavirus type 1 E2 protein in initiation of DNA replication“. Virus Res. 2001 Jun;75(2):95-106.

2. Bamshad M, Kivisild T, Watkins WS, Dixon ME, Ricker CE, Rao BB, Naidu JM, Prasad BV, Reddy PG, Rasanayagam A, Papiha SS, Villems R, Redd AJ, Hammer MF, Nguyen SV, Carroll ML, Batzer MA, Jorde LB. „Genetic evidence on the origins of Indian caste populations“. Genome Res. 2001 Jun;11(6):994-1004.

3. Golubenko MV, Kivisild T, Salukov VB, Puzyrev KV, Soltobaeva JO, Tadinova VN, Eremina ER, Muraviova TP, Puzyrev VP, Villems R. „Mitochondrial DNA polymorphism in the populations of Siberia and Central Asia: lineages of East-Eurasian and West-Eurasian origin“. American Journal of Human Genetics. 2001 Oct;69(4):393-393. 

4. Kivisild T, Reidla M, Metspalu E, Parik J, Geberhiwot T, Usanga E, Chaventre A. „Eastern African origin of the human maternal lineage cluster, ancestral to people outside of Africa“. American Journal of Human Genetics. 2001 Oct;69()4:419-419.

5. Lilleväli K, Kulla A, Ord T. „Comparative expression analysis of the genes encoding polypyrimidine tract binding protein (PTB) and its neural homologue (brPTB) in prenatal and postnatal mouse brain“. Mech Dev. 2001 Mar;101(1-2):217-20.

6. Scozzari R, Cruciani F, Pangrazio A, Santolamazza P, Vona G, Moral P, Latini V, Varesi L, Memmi MM, Romano V, De Leo G, Gennarelli M, Jaruzelska J, Villems R, Parik J, Macaulay V, Torroni A.
„Human Y-chromosome variation in the western Mediterranean area: implications for the peopling of the regioon“. Hum Immunol. 2001 Sep;62(9):871-84.

7. Stepanov VA, Puzyrev VP, Kharkov VN, Rootsi S, Spiridonova MG, Soltobaeva ZO, Villems R. „Diversity of paternal lineages in populations of Siberia and Central Asia“. American Journal of Human Genetics. 2001 Oct;69(4):400-400.

8. Torroni A, Bandelt HJ, Macaulay V, Richards M, Cruciani F, Rengo C, Martinez-Cabrera V, Villems R, Kivisild T, Metspalu E, Parik J, Tolk HV, Tambets K, Forster P, Karger B, Francalacci P, Rudan P, Janicijevic B, Rickards O, Savontaus ML, Huoponen K, Laitinen V, Koivumäki S, Sykes B, Hickey E, Novelletto A, Moral P, Sellitto D, Coppa A, Al-Zaheri N, Santachiara-Benerecetti AS, Semino O, Scozzari R. „A signal, from human mtDNA, of postglacial recolonization in Europe“. Am J Hum Genet. 2001 Oct;69(4):844-52. Epub 2001 Aug 21.